Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CGB1A6NKQ9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.67■□□□□ 0.9
CGB1A6NKQ9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.67■□□□□ 0.9
CGB1A6NKQ9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CGB1A6NKQ9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CGB1A6NKQ9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.67■□□□□ 0.9
CGB1A6NKQ9 DRD5P2-201ENST00000421395 2012 ntBASIC20.66■□□□□ 0.9
CGB1A6NKQ9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CGB1A6NKQ9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CGB1A6NKQ9 SUZ12P1-203ENST00000578195 985 ntBASIC20.66■□□□□ 0.9
CGB1A6NKQ9 AC142086.6-201ENST00000621154 1765 ntBASIC20.66■□□□□ 0.9
CGB1A6NKQ9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.66■□□□□ 0.9
CGB1A6NKQ9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CGB1A6NKQ9 MIR762-201ENST00000390236 83 ntBASIC20.65■□□□□ 0.9
CGB1A6NKQ9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.65■□□□□ 0.9
CGB1A6NKQ9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.65■□□□□ 0.9
CGB1A6NKQ9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.64■□□□□ 0.89
CGB1A6NKQ9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CGB1A6NKQ9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CGB1A6NKQ9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CGB1A6NKQ9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CGB1A6NKQ9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CGB1A6NKQ9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CGB1A6NKQ9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CGB1A6NKQ9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CGB1A6NKQ9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CGB1A6NKQ9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.61■□□□□ 0.89
CGB1A6NKQ9 AC127502.1-201ENST00000399971 1502 ntBASIC20.61■□□□□ 0.89
CGB1A6NKQ9 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CGB1A6NKQ9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CGB1A6NKQ9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.6■□□□□ 0.89
CGB1A6NKQ9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.6■□□□□ 0.89
CGB1A6NKQ9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.6■□□□□ 0.89
CGB1A6NKQ9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CGB1A6NKQ9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.59■□□□□ 0.89
CGB1A6NKQ9 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CGB1A6NKQ9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CGB1A6NKQ9 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.59■□□□□ 0.89
CGB1A6NKQ9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CGB1A6NKQ9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CGB1A6NKQ9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CGB1A6NKQ9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CGB1A6NKQ9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.58■□□□□ 0.88
CGB1A6NKQ9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CGB1A6NKQ9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CGB1A6NKQ9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CGB1A6NKQ9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.57■□□□□ 0.88
CGB1A6NKQ9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CGB1A6NKQ9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.57■□□□□ 0.88
CGB1A6NKQ9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CGB1A6NKQ9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CGB1A6NKQ9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CGB1A6NKQ9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CGB1A6NKQ9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CGB1A6NKQ9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
CGB1A6NKQ9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CGB1A6NKQ9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CGB1A6NKQ9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CGB1A6NKQ9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CGB1A6NKQ9 AP004833.2-201ENST00000532228 1454 ntBASIC20.55■□□□□ 0.88
CGB1A6NKQ9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGB1A6NKQ9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CGB1A6NKQ9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGB1A6NKQ9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGB1A6NKQ9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.54■□□□□ 0.88
CGB1A6NKQ9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CGB1A6NKQ9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.53■□□□□ 0.88
CGB1A6NKQ9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGB1A6NKQ9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGB1A6NKQ9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.53■□□□□ 0.88
CGB1A6NKQ9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CGB1A6NKQ9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CGB1A6NKQ9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CGB1A6NKQ9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CGB1A6NKQ9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CGB1A6NKQ9 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.51■□□□□ 0.87
CGB1A6NKQ9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CGB1A6NKQ9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CGB1A6NKQ9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.5■□□□□ 0.87
CGB1A6NKQ9 AC005559.1-201ENST00000589661 871 ntBASIC20.49■□□□□ 0.87
CGB1A6NKQ9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.49■□□□□ 0.87
CGB1A6NKQ9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CGB1A6NKQ9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.48■□□□□ 0.87
CGB1A6NKQ9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CGB1A6NKQ9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CGB1A6NKQ9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CGB1A6NKQ9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CGB1A6NKQ9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CGB1A6NKQ9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.47■□□□□ 0.87
CGB1A6NKQ9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.47■□□□□ 0.87
CGB1A6NKQ9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CGB1A6NKQ9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CGB1A6NKQ9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.46■□□□□ 0.87
CGB1A6NKQ9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CGB1A6NKQ9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CGB1A6NKQ9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CGB1A6NKQ9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CGB1A6NKQ9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CGB1A6NKQ9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CGB1A6NKQ9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms