Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.61■□□□□ 0.41
LINC00959A0A1B0GUT2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LINC00959A0A1B0GUT2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00959A0A1B0GUT2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00959A0A1B0GUT2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00959A0A1B0GUT2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.59■□□□□ 0.41
LINC00959A0A1B0GUT2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LINC00959A0A1B0GUT2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00959A0A1B0GUT2 AL391121.1-201ENST00000607967 1349 ntBASIC17.59■□□□□ 0.41
LINC00959A0A1B0GUT2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00959A0A1B0GUT2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00959A0A1B0GUT2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00959A0A1B0GUT2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC00959A0A1B0GUT2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC17.58■□□□□ 0.41
LINC00959A0A1B0GUT2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LINC00959A0A1B0GUT2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00959A0A1B0GUT2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00959A0A1B0GUT2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC00959A0A1B0GUT2 AP004833.2-201ENST00000532228 1454 ntBASIC17.57■□□□□ 0.4
LINC00959A0A1B0GUT2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.57■□□□□ 0.4
LINC00959A0A1B0GUT2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00959A0A1B0GUT2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00959A0A1B0GUT2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00959A0A1B0GUT2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LINC00959A0A1B0GUT2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00959A0A1B0GUT2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
LINC00959A0A1B0GUT2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00959A0A1B0GUT2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC00959A0A1B0GUT2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00959A0A1B0GUT2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00959A0A1B0GUT2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00959A0A1B0GUT2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00959A0A1B0GUT2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00959A0A1B0GUT2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00959A0A1B0GUT2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00959A0A1B0GUT2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00959A0A1B0GUT2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00959A0A1B0GUT2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00959A0A1B0GUT2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00959A0A1B0GUT2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC00959A0A1B0GUT2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00959A0A1B0GUT2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00959A0A1B0GUT2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00959A0A1B0GUT2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00959A0A1B0GUT2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LINC00959A0A1B0GUT2 CAHM-201ENST00000604200 896 ntBASIC17.53■□□□□ 0.4
LINC00959A0A1B0GUT2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00959A0A1B0GUT2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
LINC00959A0A1B0GUT2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC00959A0A1B0GUT2 AC127502.1-201ENST00000399971 1502 ntBASIC17.52■□□□□ 0.39
LINC00959A0A1B0GUT2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC00959A0A1B0GUT2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC00959A0A1B0GUT2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC00959A0A1B0GUT2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC00959A0A1B0GUT2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC17.51■□□□□ 0.39
LINC00959A0A1B0GUT2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
LINC00959A0A1B0GUT2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
LINC00959A0A1B0GUT2 AC097358.2-201ENST00000607541 1159 ntBASIC17.51■□□□□ 0.39
LINC00959A0A1B0GUT2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC17.51■□□□□ 0.39
LINC00959A0A1B0GUT2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LINC00959A0A1B0GUT2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LINC00959A0A1B0GUT2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.5■□□□□ 0.39
LINC00959A0A1B0GUT2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00959A0A1B0GUT2 AC136428.2-201ENST00000563187 214 ntBASIC17.5■□□□□ 0.39
LINC00959A0A1B0GUT2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00959A0A1B0GUT2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC17.5■□□□□ 0.39
LINC00959A0A1B0GUT2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00959A0A1B0GUT2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00959A0A1B0GUT2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00959A0A1B0GUT2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00959A0A1B0GUT2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00959A0A1B0GUT2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.49■□□□□ 0.39
LINC00959A0A1B0GUT2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00959A0A1B0GUT2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00959A0A1B0GUT2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00959A0A1B0GUT2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LINC00959A0A1B0GUT2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
LINC00959A0A1B0GUT2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00959A0A1B0GUT2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00959A0A1B0GUT2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00959A0A1B0GUT2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LINC00959A0A1B0GUT2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00959A0A1B0GUT2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LINC00959A0A1B0GUT2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LINC00959A0A1B0GUT2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00959A0A1B0GUT2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00959A0A1B0GUT2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00959A0A1B0GUT2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00959A0A1B0GUT2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00959A0A1B0GUT2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LINC00959A0A1B0GUT2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00959A0A1B0GUT2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17.45■□□□□ 0.38
LINC00959A0A1B0GUT2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00959A0A1B0GUT2 BX255925.1-201ENST00000566954 1854 ntBASIC17.45■□□□□ 0.38
LINC00959A0A1B0GUT2 AL121749.1-202ENST00000609313 2153 ntBASIC17.45■□□□□ 0.38
LINC00959A0A1B0GUT2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00959A0A1B0GUT2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00959A0A1B0GUT2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00959A0A1B0GUT2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00959A0A1B0GUT2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms