Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.86■□□□□ 0.45
TRAV16A0A0A6YYK6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV16A0A0A6YYK6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV16A0A0A6YYK6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV16A0A0A6YYK6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV16A0A0A6YYK6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV16A0A0A6YYK6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV16A0A0A6YYK6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV16A0A0A6YYK6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV16A0A0A6YYK6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV16A0A0A6YYK6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV16A0A0A6YYK6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV16A0A0A6YYK6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRAV16A0A0A6YYK6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV16A0A0A6YYK6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV16A0A0A6YYK6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV16A0A0A6YYK6 SETD8P1-201ENST00000623146 1180 ntBASIC17.81■□□□□ 0.44
TRAV16A0A0A6YYK6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV16A0A0A6YYK6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV16A0A0A6YYK6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRAV16A0A0A6YYK6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV16A0A0A6YYK6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV16A0A0A6YYK6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV16A0A0A6YYK6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRAV16A0A0A6YYK6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TRAV16A0A0A6YYK6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV16A0A0A6YYK6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRAV16A0A0A6YYK6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV16A0A0A6YYK6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV16A0A0A6YYK6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV16A0A0A6YYK6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV16A0A0A6YYK6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV16A0A0A6YYK6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
TRAV16A0A0A6YYK6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV16A0A0A6YYK6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV16A0A0A6YYK6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV16A0A0A6YYK6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
TRAV16A0A0A6YYK6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV16A0A0A6YYK6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV16A0A0A6YYK6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV16A0A0A6YYK6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV16A0A0A6YYK6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV16A0A0A6YYK6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV16A0A0A6YYK6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.76■□□□□ 0.43
TRAV16A0A0A6YYK6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV16A0A0A6YYK6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV16A0A0A6YYK6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TRAV16A0A0A6YYK6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV16A0A0A6YYK6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV16A0A0A6YYK6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV16A0A0A6YYK6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRAV16A0A0A6YYK6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV16A0A0A6YYK6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV16A0A0A6YYK6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV16A0A0A6YYK6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV16A0A0A6YYK6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV16A0A0A6YYK6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV16A0A0A6YYK6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV16A0A0A6YYK6 AL133380.1-201ENST00000506013 324 ntBASIC17.73■□□□□ 0.43
TRAV16A0A0A6YYK6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV16A0A0A6YYK6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRAV16A0A0A6YYK6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV16A0A0A6YYK6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV16A0A0A6YYK6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRAV16A0A0A6YYK6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV16A0A0A6YYK6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV16A0A0A6YYK6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV16A0A0A6YYK6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAV16A0A0A6YYK6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV16A0A0A6YYK6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV16A0A0A6YYK6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV16A0A0A6YYK6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV16A0A0A6YYK6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
TRAV16A0A0A6YYK6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV16A0A0A6YYK6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TRAV16A0A0A6YYK6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV16A0A0A6YYK6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV16A0A0A6YYK6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV16A0A0A6YYK6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV16A0A0A6YYK6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV16A0A0A6YYK6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV16A0A0A6YYK6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV16A0A0A6YYK6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRAV16A0A0A6YYK6 AC097358.2-201ENST00000607541 1159 ntBASIC17.68■□□□□ 0.42
TRAV16A0A0A6YYK6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV16A0A0A6YYK6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV16A0A0A6YYK6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRAV16A0A0A6YYK6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV16A0A0A6YYK6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TRAV16A0A0A6YYK6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRAV16A0A0A6YYK6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRAV16A0A0A6YYK6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV16A0A0A6YYK6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV16A0A0A6YYK6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV16A0A0A6YYK6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRAV16A0A0A6YYK6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV16A0A0A6YYK6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV16A0A0A6YYK6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV16A0A0A6YYK6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV16A0A0A6YYK6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms