Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
TNFSF12-TNFSF13A0A0A6YY99 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
TNFSF12-TNFSF13A0A0A6YY99 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TNFSF12-TNFSF13A0A0A6YY99 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.64■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.64■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.64■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 AC127502.1-201ENST00000399971 1502 ntBASIC23.61■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.61■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 MIR7108-201ENST00000614319 87 ntBASIC23.61■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.61■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 ABCB10P3-201ENST00000561950 2166 ntBASIC23.6■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.59■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.58■■□□□ 1.37
TNFSF12-TNFSF13A0A0A6YY99 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.57■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.57■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.56■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.55■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 DUX4L29-201ENST00000425409 679 ntBASIC23.55■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 ZNRF2P2-203ENST00000454624 420 ntBASIC23.55■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.54■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 AL139393.2-201ENST00000608721 2025 ntBASIC23.53■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
TNFSF12-TNFSF13A0A0A6YY99 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.51■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 AC021231.2-201ENST00000594613 730 ntBASIC23.51■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.5■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.5■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.49■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.49■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 AP004833.2-201ENST00000532228 1454 ntBASIC23.46■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 AC139426.1-201ENST00000568218 2529 ntBASIC23.46■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
TNFSF12-TNFSF13A0A0A6YY99 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.45■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.45■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.45■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.44■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.44■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.44■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.42■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 LINC00273-201ENST00000539813 1452 ntBASIC23.41■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.4■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TNFSF12-TNFSF13A0A0A6YY99 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms