Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.731e-9■□□□□ 10.6
PRPF8Q6P2Q9 C15orf39-206ENST00000565074 3152 ntAPPRIS ALT29.6□□□□□ -0.871e-9■□□□□ 10.6
PRPF8Q6P2Q9 DDA1-201ENST00000359866 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.891e-9■□□□□ 10.6
PRPF8Q6P2Q9 SLC47A1-210ENST00000575362 455 ntTSL 36.68□□□□□ -1.341e-9■□□□□ 10.6
PRPF8Q6P2Q9 SREBF1-213ENST00000485080 1230 ntTSL 515.11■□□□□ 0.013e-6■□□□□ 10.6
PRPF8Q6P2Q9 SREBF1-218ENST00000578469 588 ntTSL 313.39□□□□□ -0.273e-6■□□□□ 10.6
PRPF8Q6P2Q9 GNAI2-212ENST00000492383 989 ntTSL 216.81■□□□□ 0.287e-10■□□□□ 10.6
PRPF8Q6P2Q9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.27□□□□□ -0.127e-10■□□□□ 10.6
PRPF8Q6P2Q9 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.5□□□□□ -0.417e-10■□□□□ 10.6
PRPF8Q6P2Q9 GNAI2-210ENST00000490122 2445 ntTSL 211.22□□□□□ -0.617e-10■□□□□ 10.6
PRPF8Q6P2Q9 GNAI2-208ENST00000468422 531 ntTSL 210.03□□□□□ -0.87e-10■□□□□ 10.6
PRPF8Q6P2Q9 GATAD2A-212ENST00000494516 640 ntTSL 217.43■□□□□ 0.381e-8■□□□□ 10.6
PRPF8Q6P2Q9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.121e-6■□□□□ 10.6
PRPF8Q6P2Q9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.121e-6■□□□□ 10.6
PRPF8Q6P2Q9 FLII-217ENST00000577402 689 ntTSL 214.95□□□□□ -0.021e-8■□□□□ 10.6
PRPF8Q6P2Q9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.26□□□□□ -0.131e-6■□□□□ 10.6
PRPF8Q6P2Q9 PRELID3A-207ENST00000589952 488 ntTSL 414.06□□□□□ -0.161e-6■□□□□ 10.6
PRPF8Q6P2Q9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.9□□□□□ -0.181e-6■□□□□ 10.6
PRPF8Q6P2Q9 PRELID3A-206ENST00000589565 777 ntTSL 313.74□□□□□ -0.211e-6■□□□□ 10.6
PRPF8Q6P2Q9 AIFM3-205ENST00000426113 521 ntTSL 413.33□□□□□ -0.288e-7■□□□□ 10.6
PRPF8Q6P2Q9 PRELID3A-205ENST00000588729 529 ntTSL 413.29□□□□□ -0.281e-6■□□□□ 10.6
PRPF8Q6P2Q9 PRELID3A-204ENST00000587862 580 ntTSL 513.28□□□□□ -0.281e-6■□□□□ 10.6
PRPF8Q6P2Q9 AIFM3-208ENST00000441376 606 ntTSL 312.56□□□□□ -0.48e-7■□□□□ 10.6
PRPF8Q6P2Q9 STIM1-212ENST00000531332 561 ntTSL 212.03□□□□□ -0.481e-8■□□□□ 10.6
PRPF8Q6P2Q9 ECHDC2-218ENST00000493896 714 ntTSL 311.37□□□□□ -0.591e-8■□□□□ 10.6
PRPF8Q6P2Q9 PICK1-208ENST00000445628 631 ntTSL 410.93□□□□□ -0.661e-8■□□□□ 10.6
PRPF8Q6P2Q9 ECHDC2-213ENST00000487040 557 ntTSL 310.66□□□□□ -0.71e-8■□□□□ 10.6
PRPF8Q6P2Q9 STIM1-205ENST00000526156 1024 ntTSL 210.32□□□□□ -0.761e-8■□□□□ 10.6
PRPF8Q6P2Q9 STIM1-206ENST00000526596 1214 ntTSL 59.01□□□□□ -0.971e-8■□□□□ 10.6
PRPF8Q6P2Q9 APOA2-206ENST00000469730 265 ntTSL 59.59□□□□□ -0.872e-16■□□□□ 10.6
PRPF8Q6P2Q9 AXIN2-207ENST00000585045 1034 ntTSL 217.48■□□□□ 0.397e-32■□□□□ 10.6
PRPF8Q6P2Q9 SGSH-202ENST00000570427 583 ntTSL 313.89□□□□□ -0.191e-6■□□□□ 10.6
PRPF8Q6P2Q9 SGSH-207ENST00000571675 571 ntTSL 212.98□□□□□ -0.331e-6■□□□□ 10.6
PRPF8Q6P2Q9 SGSH-215ENST00000576707 546 ntTSL 49.83□□□□□ -0.841e-6■□□□□ 10.6
PRPF8Q6P2Q9 HP1BP3-209ENST00000437575 473 ntTSL 321.56■■□□□ 1.044e-7■□□□□ 10.6
PRPF8Q6P2Q9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.251e-9■□□□□ 10.6
PRPF8Q6P2Q9 RAB11FIP3-210ENST00000487899 669 ntTSL 39.81□□□□□ -0.843e-8■□□□□ 10.6
PRPF8Q6P2Q9 UXT-203ENST00000376964 894 ntTSL 212.83□□□□□ -0.362e-8■□□□□ 10.6
PRPF8Q6P2Q9 NCOR2-211ENST00000443451 951 ntTSL 512.57□□□□□ -0.46e-7■□□□□ 10.6
PRPF8Q6P2Q9 ILVBL-204ENST00000527093 1090 ntTSL 1 (best)16.42■□□□□ 0.222e-6■□□□□ 10.6
PRPF8Q6P2Q9 ILVBL-214ENST00000600984 709 ntTSL 314.82□□□□□ -0.042e-6■□□□□ 10.6
PRPF8Q6P2Q9 SCFD1-220ENST00000556486 974 ntTSL 28.94□□□□□ -0.988e-15■□□□□ 10.6
PRPF8Q6P2Q9 ILVBL-208ENST00000533747 788 ntTSL 216.42■□□□□ 0.222e-8■□□□□ 10.6
PRPF8Q6P2Q9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.25■□□□□ 0.351e-6■□□□□ 10.6
PRPF8Q6P2Q9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.31e-6■□□□□ 10.6
PRPF8Q6P2Q9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.221e-6■□□□□ 10.6
PRPF8Q6P2Q9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.73■□□□□ 0.111e-6■□□□□ 10.6
PRPF8Q6P2Q9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.42□□□□□ -0.261e-6■□□□□ 10.6
PRPF8Q6P2Q9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.31e-6■□□□□ 10.6
PRPF8Q6P2Q9 OTUB1-201ENST00000301453 2493 ntTSL 212.17□□□□□ -0.461e-6■□□□□ 10.6
PRPF8Q6P2Q9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.12■□□□□ 0.172e-8■□□□□ 10.6
PRPF8Q6P2Q9 LSM14A-205ENST00000586157 944 ntTSL 511.8□□□□□ -0.522e-8■□□□□ 10.6
PRPF8Q6P2Q9 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.642e-8■□□□□ 10.6
PRPF8Q6P2Q9 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.672e-8■□□□□ 10.6
PRPF8Q6P2Q9 MIB2-230ENST00000514363 592 ntTSL 314.35□□□□□ -0.114e-6■□□□□ 10.6
PRPF8Q6P2Q9 HDLBP-235ENST00000476807 1070 ntTSL 59.82□□□□□ -0.841e-16■□□□□ 10.6
PRPF8Q6P2Q9 AL121845.2-202ENST00000476221 446 ntTSL 515.2■□□□□ 0.025e-7■□□□□ 10.6
PRPF8Q6P2Q9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.315e-7■□□□□ 10.6
PRPF8Q6P2Q9 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC11.29□□□□□ -0.62e-6■□□□□ 10.6
PRPF8Q6P2Q9 UNC13D-203ENST00000585574 658 ntTSL 314.75□□□□□ -0.059e-9■□□□□ 10.6
PRPF8Q6P2Q9 ABCC1-203ENST00000572053 744 ntTSL 310.09□□□□□ -0.796e-12■□□□□ 10.6
PRPF8Q6P2Q9 SNORD36A-201ENST00000362874 73 ntBASIC-1.66□□□□□ -2.671e-24■□□□□ 10.6
PRPF8Q6P2Q9 CPNE7-204ENST00000526232 488 ntTSL 315.33■□□□□ 0.058e-7■□□□□ 10.6
PRPF8Q6P2Q9 HGS-210ENST00000573320 547 ntTSL 312.82□□□□□ -0.362e-7■□□□□ 10.6
PRPF8Q6P2Q9 DHRS3-201ENST00000430996 826 ntTSL 315.63■□□□□ 0.091e-10■□□□□ 10.6
PRPF8Q6P2Q9 DHRS3-202ENST00000464917 539 ntTSL 311.51□□□□□ -0.571e-10■□□□□ 10.6
PRPF8Q6P2Q9 TRAPPC8-213ENST00000584876 715 ntTSL 520.13■□□□□ 0.812e-6■□□□□ 10.6
PRPF8Q6P2Q9 TRAPPC8-202ENST00000577426 437 ntTSL 54.44□□□□□ -1.72e-6■□□□□ 10.6
PRPF8Q6P2Q9 AC135050.2-202ENST00000532364 499 ntTSL 418.84■□□□□ 0.615e-8■□□□□ 10.6
PRPF8Q6P2Q9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.27■□□□□ 0.365e-8■□□□□ 10.6
PRPF8Q6P2Q9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.92■□□□□ 0.35e-8■□□□□ 10.6
PRPF8Q6P2Q9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.045e-8■□□□□ 10.6
PRPF8Q6P2Q9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.045e-8■□□□□ 10.6
PRPF8Q6P2Q9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.77□□□□□ -0.045e-8■□□□□ 10.6
PRPF8Q6P2Q9 VKORC1-206ENST00000420057 746 ntTSL 212.59□□□□□ -0.395e-8■□□□□ 10.6
PRPF8Q6P2Q9 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC10.75□□□□□ -0.695e-8■□□□□ 10.6
PRPF8Q6P2Q9 VKORC1-208ENST00000498155 870 ntTSL 5 BASIC8.2□□□□□ -1.15e-8■□□□□ 10.6
PRPF8Q6P2Q9 AIG1-204ENST00000367601 727 ntTSL 511.5□□□□□ -0.572e-8■□□□□ 10.6
PRPF8Q6P2Q9 AIG1-205ENST00000447498 444 ntTSL 510.51□□□□□ -0.732e-8■□□□□ 10.6
PRPF8Q6P2Q9 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.38□□□□□ -1.392e-8■□□□□ 10.6
PRPF8Q6P2Q9 AIG1-206ENST00000458219 593 ntTSL 25.66□□□□□ -1.52e-8■□□□□ 10.6
PRPF8Q6P2Q9 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.82□□□□□ -1.642e-8■□□□□ 10.6
PRPF8Q6P2Q9 AIG1-207ENST00000470265 572 ntTSL 22.02□□□□□ -2.092e-8■□□□□ 10.6
PRPF8Q6P2Q9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.97■■□□□ 1.117e-7■□□□□ 10.5
PRPF8Q6P2Q9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.72■□□□□ 0.917e-7■□□□□ 10.5
PRPF8Q6P2Q9 WIZ-208ENST00000600632 546 ntTSL 218.04■□□□□ 0.482e-12■□□□□ 10.5
PRPF8Q6P2Q9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.28■□□□□ 0.367e-7■□□□□ 10.5
PRPF8Q6P2Q9 RDX-211ENST00000530749 2558 ntTSL 216.8■□□□□ 0.287e-7■□□□□ 10.5
PRPF8Q6P2Q9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.147e-7■□□□□ 10.5
PRPF8Q6P2Q9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.44■□□□□ 0.067e-7■□□□□ 10.5
PRPF8Q6P2Q9 TBX18-204ENST00000606521 1262 ntTSL 1 (best)15.21■□□□□ 0.037e-7■□□□□ 10.5
PRPF8Q6P2Q9 ABCA7-213ENST00000530703 539 ntTSL 214.26□□□□□ -0.137e-7■□□□□ 10.5
PRPF8Q6P2Q9 RDX-217ENST00000534683 562 ntTSL 414.15□□□□□ -0.147e-7■□□□□ 10.5
PRPF8Q6P2Q9 TBX18-203ENST00000606325 742 ntTSL 514.14□□□□□ -0.157e-7■□□□□ 10.5
PRPF8Q6P2Q9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.14□□□□□ -0.157e-7■□□□□ 10.5
PRPF8Q6P2Q9 ABCA7-210ENST00000527496 591 ntTSL 414.07□□□□□ -0.167e-7■□□□□ 10.5
PRPF8Q6P2Q9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.197e-7■□□□□ 10.5
PRPF8Q6P2Q9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.267e-7■□□□□ 10.5
PRPF8Q6P2Q9 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.74□□□□□ -0.377e-7■□□□□ 10.5
PRPF8Q6P2Q9 RDX-209ENST00000530131 1911 ntTSL 212.28□□□□□ -0.447e-7■□□□□ 10.5
Retrieved 100 of 73,762 protein–RNA pairs in 713.9 ms