Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 AC018470.1-201ENST00000624790 3129 ntBASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 Z82202.1-201ENST00000623446 1880 ntBASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
COMMD3-BMI1R4GMX3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3-BMI1R4GMX3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 AC008406.3-201ENST00000620001 1374 ntBASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 FP700111.2-201ENST00000619190 1892 ntBASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 AC099791.1-201ENST00000416440 715 ntBASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 AC096631.2-201ENST00000436136 790 ntBASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 AC027682.1-201ENST00000562846 899 ntBASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 AC008764.7-201ENST00000593779 1081 ntBASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.69■□□□□ 0.58
COMMD3-BMI1R4GMX3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms