Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN16Q9Y5I7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN16Q9Y5I7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN16Q9Y5I7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN16Q9Y5I7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN16Q9Y5I7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLDN16Q9Y5I7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN16Q9Y5I7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN16Q9Y5I7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CLDN16Q9Y5I7 AL691432.2-201ENST00000607222 2038 ntBASIC18.64■□□□□ 0.58
CLDN16Q9Y5I7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN16Q9Y5I7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 MTDHP1-201ENST00000605323 784 ntBASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN16Q9Y5I7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 KRT17P3-201ENST00000420566 1262 ntBASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 AC098590.1-201ENST00000468126 897 ntBASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 KRT16P6-202ENST00000425692 1426 ntBASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN16Q9Y5I7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 RN7SL471P-201ENST00000580476 299 ntBASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 TMEM191A-211ENST00000637163 1067 ntBASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms