Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SPG7Q9UQ90 LINC00565-201ENST00000562710 2331 ntBASIC26.21■■□□□ 1.79
SPG7Q9UQ90 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SPG7Q9UQ90 PLK5-205ENST00000642079 1969 ntBASIC26.21■■□□□ 1.79
SPG7Q9UQ90 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
SPG7Q9UQ90 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC26.21■■□□□ 1.79
SPG7Q9UQ90 AC116562.2-201ENST00000507042 360 ntBASIC26.21■■□□□ 1.79
SPG7Q9UQ90 RN7SL850P-201ENST00000579959 291 ntBASIC26.21■■□□□ 1.79
SPG7Q9UQ90 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC26.21■■□□□ 1.79
SPG7Q9UQ90 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC26.21■■□□□ 1.79
SPG7Q9UQ90 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC26.21■■□□□ 1.79
SPG7Q9UQ90 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC26.21■■□□□ 1.79
SPG7Q9UQ90 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SPG7Q9UQ90 ERF-202ENST00000440177 2032 ntTSL 2 BASIC26.21■■□□□ 1.79
SPG7Q9UQ90 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC26.21■■□□□ 1.79
SPG7Q9UQ90 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SPG7Q9UQ90 FEM1AP4-201ENST00000443167 1987 ntBASIC26.2■■□□□ 1.79
SPG7Q9UQ90 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SPG7Q9UQ90 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SPG7Q9UQ90 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC26.2■■□□□ 1.78
SPG7Q9UQ90 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SPG7Q9UQ90 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SPG7Q9UQ90 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC26.2■■□□□ 1.78
SPG7Q9UQ90 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
SPG7Q9UQ90 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SPG7Q9UQ90 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
SPG7Q9UQ90 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
SPG7Q9UQ90 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
SPG7Q9UQ90 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC26.19■■□□□ 1.78
SPG7Q9UQ90 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SPG7Q9UQ90 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
SPG7Q9UQ90 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SPG7Q9UQ90 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SPG7Q9UQ90 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC26.19■■□□□ 1.78
SPG7Q9UQ90 MIR1238-201ENST00000408483 83 ntBASIC26.19■■□□□ 1.78
SPG7Q9UQ90 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC26.19■■□□□ 1.78
SPG7Q9UQ90 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
SPG7Q9UQ90 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.19■■□□□ 1.78
SPG7Q9UQ90 KRT16P1-201ENST00000399124 1418 ntBASIC26.19■■□□□ 1.78
SPG7Q9UQ90 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.19■■□□□ 1.78
SPG7Q9UQ90 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.19■■□□□ 1.78
SPG7Q9UQ90 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SPG7Q9UQ90 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPG7Q9UQ90 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC26.18■■□□□ 1.78
SPG7Q9UQ90 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPG7Q9UQ90 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPG7Q9UQ90 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
SPG7Q9UQ90 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPG7Q9UQ90 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPG7Q9UQ90 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPG7Q9UQ90 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
SPG7Q9UQ90 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC26.18■■□□□ 1.78
SPG7Q9UQ90 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC26.18■■□□□ 1.78
SPG7Q9UQ90 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SPG7Q9UQ90 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SPG7Q9UQ90 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPG7Q9UQ90 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPG7Q9UQ90 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC26.18■■□□□ 1.78
SPG7Q9UQ90 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC26.17■■□□□ 1.78
SPG7Q9UQ90 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC26.17■■□□□ 1.78
SPG7Q9UQ90 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SPG7Q9UQ90 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SPG7Q9UQ90 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SPG7Q9UQ90 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SPG7Q9UQ90 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC26.17■■□□□ 1.78
SPG7Q9UQ90 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC26.17■■□□□ 1.78
SPG7Q9UQ90 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC26.17■■□□□ 1.78
SPG7Q9UQ90 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC26.17■■□□□ 1.78
SPG7Q9UQ90 AC005363.2-201ENST00000618631 242 ntBASIC26.17■■□□□ 1.78
SPG7Q9UQ90 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SPG7Q9UQ90 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC26.17■■□□□ 1.78
SPG7Q9UQ90 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SPG7Q9UQ90 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
SPG7Q9UQ90 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC26.16■■□□□ 1.78
SPG7Q9UQ90 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC26.16■■□□□ 1.78
SPG7Q9UQ90 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC26.16■■□□□ 1.78
SPG7Q9UQ90 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SPG7Q9UQ90 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC26.16■■□□□ 1.78
SPG7Q9UQ90 AC092865.7-201ENST00000641832 219 ntBASIC26.16■■□□□ 1.78
SPG7Q9UQ90 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SPG7Q9UQ90 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
SPG7Q9UQ90 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SPG7Q9UQ90 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SPG7Q9UQ90 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SPG7Q9UQ90 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SPG7Q9UQ90 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SPG7Q9UQ90 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
SPG7Q9UQ90 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SPG7Q9UQ90 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
SPG7Q9UQ90 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC26.15■■□□□ 1.78
SPG7Q9UQ90 FITM1-202ENST00000559294 800 ntBASIC26.15■■□□□ 1.78
SPG7Q9UQ90 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC26.15■■□□□ 1.78
SPG7Q9UQ90 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC26.15■■□□□ 1.78
SPG7Q9UQ90 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC26.15■■□□□ 1.78
SPG7Q9UQ90 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SPG7Q9UQ90 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC26.15■■□□□ 1.78
SPG7Q9UQ90 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC26.15■■□□□ 1.78
SPG7Q9UQ90 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC26.14■■□□□ 1.78
SPG7Q9UQ90 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SPG7Q9UQ90 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms