Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 AL355802.2-201ENST00000402069 882 ntBASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGC3Q9UN70 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 AL390719.1-204ENST00000412397 1219 ntBASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 AC060766.5-201ENST00000590539 871 ntBASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGC3Q9UN70 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 SLC25A24-204ENST00000569674 2357 ntBASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 AC092368.3-202ENST00000574180 1591 ntBASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 AC009237.14-201ENST00000609975 1594 ntBASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHGC3Q9UN70 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGC3Q9UN70 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGC3Q9UN70 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGC3Q9UN70 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGC3Q9UN70 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGC3Q9UN70 PCDHAC2-203ENST00000615316 3011 ntBASIC21.08■□□□□ 0.97
PCDHGC3Q9UN70 PHGDH-210ENST00000641115 1638 ntBASIC21.08■□□□□ 0.97
PCDHGC3Q9UN70 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGC3Q9UN70 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDHGC3Q9UN70 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGC3Q9UN70 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDHGC3Q9UN70 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGC3Q9UN70 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGC3Q9UN70 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDHGC3Q9UN70 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGC3Q9UN70 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.08■□□□□ 0.97
PCDHGC3Q9UN70 PNMA6B-201ENST00000538162 1200 ntBASIC21.08■□□□□ 0.97
PCDHGC3Q9UN70 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.08■□□□□ 0.96
PCDHGC3Q9UN70 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
PCDHGC3Q9UN70 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms