Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 DPP3P2-201ENST00000416030 1696 ntBASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.54■□□□□ 0.4
COMMD3Q9UBI1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 AL049812.1-201ENST00000432563 2267 ntBASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 AL356740.2-201ENST00000601559 647 ntBASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 BX119927.1-201ENST00000636596 1552 ntBASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD3Q9UBI1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 SERBP1P1-201ENST00000396021 1160 ntBASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 AL138724.1-201ENST00000606771 1088 ntBASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD3Q9UBI1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
COMMD3Q9UBI1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COMMD3Q9UBI1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COMMD3Q9UBI1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COMMD3Q9UBI1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms