Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPF1Q9NWY4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HPF1Q9NWY4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPF1Q9NWY4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HPF1Q9NWY4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HPF1Q9NWY4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HPF1Q9NWY4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPF1Q9NWY4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPF1Q9NWY4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPF1Q9NWY4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.5■□□□□ 0.55
HPF1Q9NWY4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HPF1Q9NWY4 AC098590.1-201ENST00000468126 897 ntBASIC18.5■□□□□ 0.55
HPF1Q9NWY4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HPF1Q9NWY4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.5■□□□□ 0.55
HPF1Q9NWY4 AC142381.4-202ENST00000563973 229 ntBASIC18.5■□□□□ 0.55
HPF1Q9NWY4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.5■□□□□ 0.55
HPF1Q9NWY4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.5■□□□□ 0.55
HPF1Q9NWY4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HPF1Q9NWY4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 AL158047.1-201ENST00000445918 881 ntBASIC18.49■□□□□ 0.55
HPF1Q9NWY4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 AC069544.1-201ENST00000609399 999 ntBASIC18.49■□□□□ 0.55
HPF1Q9NWY4 AC120498.8-201ENST00000614275 531 ntBASIC18.49■□□□□ 0.55
HPF1Q9NWY4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPF1Q9NWY4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPF1Q9NWY4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.48■□□□□ 0.55
HPF1Q9NWY4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HPF1Q9NWY4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.48■□□□□ 0.55
HPF1Q9NWY4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HPF1Q9NWY4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPF1Q9NWY4 GCSHP5-201ENST00000443090 522 ntBASIC18.48■□□□□ 0.55
HPF1Q9NWY4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
HPF1Q9NWY4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.48■□□□□ 0.55
HPF1Q9NWY4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
HPF1Q9NWY4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.48■□□□□ 0.55
HPF1Q9NWY4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPF1Q9NWY4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.48■□□□□ 0.55
HPF1Q9NWY4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HPF1Q9NWY4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPF1Q9NWY4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HPF1Q9NWY4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPF1Q9NWY4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 HLA-G-202ENST00000376815 851 ntBASIC18.47■□□□□ 0.55
HPF1Q9NWY4 HLA-G-203ENST00000376818 1127 ntBASIC18.47■□□□□ 0.55
HPF1Q9NWY4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HPF1Q9NWY4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HPF1Q9NWY4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HPF1Q9NWY4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.46■□□□□ 0.55
HPF1Q9NWY4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms