Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB16Q9NRJ7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 KRT19P1-201ENST00000405746 1186 ntBASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 AC097381.1-201ENST00000429019 1296 ntBASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB16Q9NRJ7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB16Q9NRJ7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB16Q9NRJ7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHB16Q9NRJ7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB16Q9NRJ7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB16Q9NRJ7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB16Q9NRJ7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PCDHB16Q9NRJ7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHB16Q9NRJ7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB16Q9NRJ7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB16Q9NRJ7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB16Q9NRJ7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB16Q9NRJ7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PCDHB16Q9NRJ7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PCDHB16Q9NRJ7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PCDHB16Q9NRJ7 RBM17P2-201ENST00000616397 1405 ntBASIC17.27■□□□□ 0.35
PCDHB16Q9NRJ7 AC090340.1-201ENST00000620778 4980 ntBASIC17.27■□□□□ 0.35
PCDHB16Q9NRJ7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDHB16Q9NRJ7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB16Q9NRJ7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB16Q9NRJ7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB16Q9NRJ7 AC005082.1-201ENST00000413042 2259 ntBASIC17.27■□□□□ 0.35
PCDHB16Q9NRJ7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB16Q9NRJ7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB16Q9NRJ7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 AC091799.1-201ENST00000422823 811 ntBASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 KRT8P36-201ENST00000489121 1440 ntBASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB16Q9NRJ7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms