Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.03■□□□□ 0.64
VCX3BQ9H321 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCX3BQ9H321 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.03■□□□□ 0.64
VCX3BQ9H321 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCX3BQ9H321 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCX3BQ9H321 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCX3BQ9H321 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.03■□□□□ 0.64
VCX3BQ9H321 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCX3BQ9H321 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCX3BQ9H321 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
VCX3BQ9H321 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
VCX3BQ9H321 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VCX3BQ9H321 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VCX3BQ9H321 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.02■□□□□ 0.64
VCX3BQ9H321 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.02■□□□□ 0.64
VCX3BQ9H321 PVT1_1.1-201ENST00000615125 194 ntBASIC19.02■□□□□ 0.64
VCX3BQ9H321 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VCX3BQ9H321 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VCX3BQ9H321 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VCX3BQ9H321 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
VCX3BQ9H321 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
VCX3BQ9H321 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
VCX3BQ9H321 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
VCX3BQ9H321 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.01■□□□□ 0.63
VCX3BQ9H321 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
VCX3BQ9H321 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCX3BQ9H321 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.01■□□□□ 0.63
VCX3BQ9H321 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCX3BQ9H321 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
VCX3BQ9H321 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCX3BQ9H321 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
VCX3BQ9H321 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCX3BQ9H321 pRNA.6-201ENST00000610482 90 ntBASIC19.01■□□□□ 0.63
VCX3BQ9H321 pRNA.5-201ENST00000612139 90 ntBASIC19.01■□□□□ 0.63
VCX3BQ9H321 pRNA.11-201ENST00000618423 90 ntBASIC19.01■□□□□ 0.63
VCX3BQ9H321 pRNA.13-201ENST00000619112 90 ntBASIC19.01■□□□□ 0.63
VCX3BQ9H321 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.01■□□□□ 0.63
VCX3BQ9H321 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.01■□□□□ 0.63
VCX3BQ9H321 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCX3BQ9H321 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
VCX3BQ9H321 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.01■□□□□ 0.63
VCX3BQ9H321 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
VCX3BQ9H321 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCX3BQ9H321 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
VCX3BQ9H321 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VCX3BQ9H321 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
VCX3BQ9H321 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCX3BQ9H321 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCX3BQ9H321 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCX3BQ9H321 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VCX3BQ9H321 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
VCX3BQ9H321 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VCX3BQ9H321 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19■□□□□ 0.63
VCX3BQ9H321 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
VCX3BQ9H321 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19■□□□□ 0.63
VCX3BQ9H321 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
VCX3BQ9H321 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19■□□□□ 0.63
VCX3BQ9H321 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
VCX3BQ9H321 AC055733.4-201ENST00000638462 1354 ntBASIC19■□□□□ 0.63
VCX3BQ9H321 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VCX3BQ9H321 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19■□□□□ 0.63
VCX3BQ9H321 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
VCX3BQ9H321 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
VCX3BQ9H321 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VCX3BQ9H321 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VCX3BQ9H321 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19■□□□□ 0.63
VCX3BQ9H321 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VCX3BQ9H321 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19■□□□□ 0.63
VCX3BQ9H321 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VCX3BQ9H321 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VCX3BQ9H321 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
VCX3BQ9H321 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19■□□□□ 0.63
VCX3BQ9H321 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.99■□□□□ 0.63
VCX3BQ9H321 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.99■□□□□ 0.63
VCX3BQ9H321 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.99■□□□□ 0.63
VCX3BQ9H321 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
VCX3BQ9H321 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.99■□□□□ 0.63
VCX3BQ9H321 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VCX3BQ9H321 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.99■□□□□ 0.63
VCX3BQ9H321 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VCX3BQ9H321 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VCX3BQ9H321 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VCX3BQ9H321 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VCX3BQ9H321 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VCX3BQ9H321 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VCX3BQ9H321 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VCX3BQ9H321 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.99■□□□□ 0.63
VCX3BQ9H321 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
VCX3BQ9H321 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VCX3BQ9H321 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.99■□□□□ 0.63
VCX3BQ9H321 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCX3BQ9H321 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCX3BQ9H321 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCX3BQ9H321 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
VCX3BQ9H321 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
VCX3BQ9H321 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCX3BQ9H321 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.98■□□□□ 0.63
VCX3BQ9H321 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCX3BQ9H321 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.98■□□□□ 0.63
VCX3BQ9H321 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms