Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC009947.2-201ENST00000444014 672 ntBASIC16.87■□□□□ 0.29
FOXC2Q99958 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.87■□□□□ 0.29
FOXC2Q99958 ECEL1P2-202ENST00000465689 757 ntBASIC16.87■□□□□ 0.29
FOXC2Q99958 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FOXC2Q99958 MYC-208ENST00000641036 567 ntBASIC16.87■□□□□ 0.29
FOXC2Q99958 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.87■□□□□ 0.29
FOXC2Q99958 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXC2Q99958 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXC2Q99958 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
FOXC2Q99958 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
FOXC2Q99958 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXC2Q99958 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXC2Q99958 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
FOXC2Q99958 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
FOXC2Q99958 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXC2Q99958 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
FOXC2Q99958 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXC2Q99958 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXC2Q99958 AC026396.1-201ENST00000419388 421 ntBASIC16.86■□□□□ 0.29
FOXC2Q99958 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXC2Q99958 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.86■□□□□ 0.29
FOXC2Q99958 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.86■□□□□ 0.29
FOXC2Q99958 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXC2Q99958 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
FOXC2Q99958 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXC2Q99958 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXC2Q99958 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXC2Q99958 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXC2Q99958 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
FOXC2Q99958 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
FOXC2Q99958 DGCR10-201ENST00000609839 495 ntBASIC16.86■□□□□ 0.29
FOXC2Q99958 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXC2Q99958 AP000550.4-202ENST00000639755 178 ntBASIC16.86■□□□□ 0.29
FOXC2Q99958 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXC2Q99958 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXC2Q99958 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXC2Q99958 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXC2Q99958 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXC2Q99958 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.86■□□□□ 0.29
FOXC2Q99958 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXC2Q99958 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXC2Q99958 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXC2Q99958 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXC2Q99958 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXC2Q99958 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXC2Q99958 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXC2Q99958 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXC2Q99958 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXC2Q99958 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXC2Q99958 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXC2Q99958 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.85■□□□□ 0.29
FOXC2Q99958 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXC2Q99958 CRYGFP-201ENST00000418459 633 ntBASIC16.85■□□□□ 0.29
FOXC2Q99958 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
FOXC2Q99958 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.85■□□□□ 0.29
FOXC2Q99958 AC026271.3-201ENST00000571884 352 ntBASIC16.85■□□□□ 0.29
FOXC2Q99958 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXC2Q99958 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXC2Q99958 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXC2Q99958 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXC2Q99958 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXC2Q99958 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXC2Q99958 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXC2Q99958 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FOXC2Q99958 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXC2Q99958 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
FOXC2Q99958 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXC2Q99958 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
FOXC2Q99958 AL031133.1-201ENST00000406807 723 ntBASIC16.84■□□□□ 0.29
FOXC2Q99958 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.84■□□□□ 0.29
FOXC2Q99958 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
FOXC2Q99958 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.84■□□□□ 0.29
FOXC2Q99958 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXC2Q99958 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
FOXC2Q99958 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.84■□□□□ 0.29
FOXC2Q99958 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXC2Q99958 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXC2Q99958 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
FOXC2Q99958 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
FOXC2Q99958 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
FOXC2Q99958 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
FOXC2Q99958 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
FOXC2Q99958 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXC2Q99958 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXC2Q99958 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FOXC2Q99958 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FOXC2Q99958 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.83■□□□□ 0.28
FOXC2Q99958 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.83■□□□□ 0.28
FOXC2Q99958 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FOXC2Q99958 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.83■□□□□ 0.28
FOXC2Q99958 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.83■□□□□ 0.28
FOXC2Q99958 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FOXC2Q99958 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FOXC2Q99958 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.83■□□□□ 0.28
FOXC2Q99958 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FOXC2Q99958 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
FOXC2Q99958 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.83■□□□□ 0.28
FOXC2Q99958 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.83■□□□□ 0.28
FOXC2Q99958 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
FOXC2Q99958 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms