Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC26.84■■□□□ 1.89
ABCA3Q99758 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
ABCA3Q99758 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
ABCA3Q99758 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC26.84■■□□□ 1.89
ABCA3Q99758 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC26.84■■□□□ 1.89
ABCA3Q99758 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
ABCA3Q99758 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ABCA3Q99758 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ABCA3Q99758 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ABCA3Q99758 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
ABCA3Q99758 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC26.83■■□□□ 1.89
ABCA3Q99758 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ABCA3Q99758 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC26.83■■□□□ 1.89
ABCA3Q99758 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
ABCA3Q99758 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC26.83■■□□□ 1.89
ABCA3Q99758 CD320-202ENST00000537716 1119 ntTSL 2 BASIC26.83■■□□□ 1.89
ABCA3Q99758 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC26.83■■□□□ 1.89
ABCA3Q99758 AC116407.4-201ENST00000623319 1061 ntBASIC26.83■■□□□ 1.89
ABCA3Q99758 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC26.83■■□□□ 1.89
ABCA3Q99758 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC26.83■■□□□ 1.89
ABCA3Q99758 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.83■■□□□ 1.89
ABCA3Q99758 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ABCA3Q99758 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
ABCA3Q99758 KRT8P20-201ENST00000423953 1409 ntBASIC26.82■■□□□ 1.88
ABCA3Q99758 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ABCA3Q99758 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ABCA3Q99758 H19-201ENST00000411754 1788 ntTSL 5 BASIC26.82■■□□□ 1.88
ABCA3Q99758 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ABCA3Q99758 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ABCA3Q99758 FAM207BP-201ENST00000447172 505 ntBASIC26.82■■□□□ 1.88
ABCA3Q99758 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC26.82■■□□□ 1.88
ABCA3Q99758 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC26.81■■□□□ 1.88
ABCA3Q99758 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
ABCA3Q99758 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
ABCA3Q99758 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ABCA3Q99758 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ABCA3Q99758 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
ABCA3Q99758 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ABCA3Q99758 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
ABCA3Q99758 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ABCA3Q99758 BET1L-202ENST00000332865 533 ntTSL 5 BASIC26.81■■□□□ 1.88
ABCA3Q99758 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC26.81■■□□□ 1.88
ABCA3Q99758 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ABCA3Q99758 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC26.81■■□□□ 1.88
ABCA3Q99758 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ABCA3Q99758 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ABCA3Q99758 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ABCA3Q99758 KRT126P-201ENST00000549467 1181 ntBASIC26.8■■□□□ 1.88
ABCA3Q99758 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC26.8■■□□□ 1.88
ABCA3Q99758 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
ABCA3Q99758 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
ABCA3Q99758 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ABCA3Q99758 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
ABCA3Q99758 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ABCA3Q99758 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC26.79■■□□□ 1.88
ABCA3Q99758 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.79■■□□□ 1.88
ABCA3Q99758 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC26.79■■□□□ 1.88
ABCA3Q99758 TPM4P1-201ENST00000436100 807 ntBASIC26.79■■□□□ 1.88
ABCA3Q99758 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC26.79■■□□□ 1.88
ABCA3Q99758 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC26.79■■□□□ 1.88
ABCA3Q99758 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC26.79■■□□□ 1.88
ABCA3Q99758 AC005332.1-201ENST00000577698 1310 ntBASIC26.79■■□□□ 1.88
ABCA3Q99758 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
ABCA3Q99758 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ABCA3Q99758 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC26.79■■□□□ 1.88
ABCA3Q99758 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC26.79■■□□□ 1.88
ABCA3Q99758 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ABCA3Q99758 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
ABCA3Q99758 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ABCA3Q99758 HCG4P8-203ENST00000443049 980 ntBASIC26.79■■□□□ 1.88
ABCA3Q99758 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC26.79■■□□□ 1.88
ABCA3Q99758 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC26.79■■□□□ 1.88
ABCA3Q99758 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
ABCA3Q99758 AC093458.2-201ENST00000623150 629 ntBASIC26.79■■□□□ 1.88
ABCA3Q99758 C9orf163-202ENST00000624034 2573 ntBASIC26.79■■□□□ 1.88
ABCA3Q99758 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC26.79■■□□□ 1.88
ABCA3Q99758 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ABCA3Q99758 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA3Q99758 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA3Q99758 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA3Q99758 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA3Q99758 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA3Q99758 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
ABCA3Q99758 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA3Q99758 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA3Q99758 AC139887.4-201ENST00000607877 719 ntBASIC26.78■■□□□ 1.88
ABCA3Q99758 AC069148.1-201ENST00000608741 768 ntBASIC26.78■■□□□ 1.88
ABCA3Q99758 AL121956.5-201ENST00000625261 221 ntBASIC26.78■■□□□ 1.88
ABCA3Q99758 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.78■■□□□ 1.88
ABCA3Q99758 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA3Q99758 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA3Q99758 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.78■■□□□ 1.88
ABCA3Q99758 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA3Q99758 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
ABCA3Q99758 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA3Q99758 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA3Q99758 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
ABCA3Q99758 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA3Q99758 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC26.77■■□□□ 1.88
ABCA3Q99758 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC26.77■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms