Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRCH3Q96II8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH3Q96II8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH3Q96II8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.71■■□□□ 1.07
LRCH3Q96II8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH3Q96II8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH3Q96II8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH3Q96II8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH3Q96II8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH3Q96II8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH3Q96II8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.71■■□□□ 1.07
LRCH3Q96II8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH3Q96II8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH3Q96II8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH3Q96II8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.71■■□□□ 1.07
LRCH3Q96II8 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.71■■□□□ 1.07
LRCH3Q96II8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH3Q96II8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.71■■□□□ 1.07
LRCH3Q96II8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.71■■□□□ 1.07
LRCH3Q96II8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH3Q96II8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH3Q96II8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRCH3Q96II8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
LRCH3Q96II8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LRCH3Q96II8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.71■■□□□ 1.07
LRCH3Q96II8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
LRCH3Q96II8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRCH3Q96II8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LRCH3Q96II8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.7■■□□□ 1.06
LRCH3Q96II8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
LRCH3Q96II8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.7■■□□□ 1.06
LRCH3Q96II8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRCH3Q96II8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRCH3Q96II8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.7■■□□□ 1.06
LRCH3Q96II8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LRCH3Q96II8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.7■■□□□ 1.06
LRCH3Q96II8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LRCH3Q96II8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRCH3Q96II8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
LRCH3Q96II8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH3Q96II8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.69■■□□□ 1.06
LRCH3Q96II8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH3Q96II8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.69■■□□□ 1.06
LRCH3Q96II8 HMGA1P5-201ENST00000412453 271 ntBASIC21.69■■□□□ 1.06
LRCH3Q96II8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH3Q96II8 COX11P1-201ENST00000489116 835 ntBASIC21.69■■□□□ 1.06
LRCH3Q96II8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.69■■□□□ 1.06
LRCH3Q96II8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.69■■□□□ 1.06
LRCH3Q96II8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.69■■□□□ 1.06
LRCH3Q96II8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.69■■□□□ 1.06
LRCH3Q96II8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.69■■□□□ 1.06
LRCH3Q96II8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.69■■□□□ 1.06
LRCH3Q96II8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH3Q96II8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.69■■□□□ 1.06
LRCH3Q96II8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.69■■□□□ 1.06
LRCH3Q96II8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH3Q96II8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH3Q96II8 KRT8P10-201ENST00000450021 1447 ntBASIC21.69■■□□□ 1.06
LRCH3Q96II8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH3Q96II8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH3Q96II8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.69■■□□□ 1.06
LRCH3Q96II8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRCH3Q96II8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRCH3Q96II8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRCH3Q96II8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LRCH3Q96II8 PGM5P4-201ENST00000421970 445 ntBASIC21.68■■□□□ 1.06
LRCH3Q96II8 AL845331.1-201ENST00000424978 1190 ntBASIC21.68■■□□□ 1.06
LRCH3Q96II8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.68■■□□□ 1.06
LRCH3Q96II8 AC011558.1-201ENST00000623459 338 ntBASIC21.68■■□□□ 1.06
LRCH3Q96II8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.68■■□□□ 1.06
LRCH3Q96II8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LRCH3Q96II8 AC092053.2-201ENST00000640557 1818 ntBASIC21.68■■□□□ 1.06
LRCH3Q96II8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.68■■□□□ 1.06
LRCH3Q96II8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LRCH3Q96II8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRCH3Q96II8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LRCH3Q96II8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRCH3Q96II8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.67■■□□□ 1.06
LRCH3Q96II8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRCH3Q96II8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRCH3Q96II8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRCH3Q96II8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.67■■□□□ 1.06
LRCH3Q96II8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LRCH3Q96II8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.67■■□□□ 1.06
LRCH3Q96II8 AL671277.2-201ENST00000458060 996 ntBASIC21.67■■□□□ 1.06
LRCH3Q96II8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.67■■□□□ 1.06
LRCH3Q96II8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.67■■□□□ 1.06
LRCH3Q96II8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRCH3Q96II8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRCH3Q96II8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.67■■□□□ 1.06
LRCH3Q96II8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRCH3Q96II8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.66■■□□□ 1.06
LRCH3Q96II8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRCH3Q96II8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRCH3Q96II8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRCH3Q96II8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRCH3Q96II8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRCH3Q96II8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRCH3Q96II8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRCH3Q96II8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms