Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTHRC1Q96CG8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTHRC1Q96CG8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTHRC1Q96CG8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.57■□□□□ 0.56
CTHRC1Q96CG8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.57■□□□□ 0.56
CTHRC1Q96CG8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTHRC1Q96CG8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTHRC1Q96CG8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CTHRC1Q96CG8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTHRC1Q96CG8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTHRC1Q96CG8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.56■□□□□ 0.56
CTHRC1Q96CG8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 AC006557.6-201ENST00000623071 864 ntBASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CTHRC1Q96CG8 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 TMEM179-206ENST00000616017 1645 ntBASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTHRC1Q96CG8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 PHGDH-210ENST00000641115 1638 ntBASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 UNC93B5-201ENST00000530315 699 ntBASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 KRT18P6-201ENST00000555540 1265 ntBASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 AC009237.14-201ENST00000609975 1594 ntBASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTHRC1Q96CG8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms