Protein–RNA interactions for Protein: Q96BQ5

CCDC127, Coiled-coil domain-containing protein 127, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC127Q96BQ5 AC023632.3-201ENST00000521633 145 ntBASIC21.75■■□□□ 1.07
CCDC127Q96BQ5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC127Q96BQ5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.75■■□□□ 1.07
CCDC127Q96BQ5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC127Q96BQ5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC127Q96BQ5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC127Q96BQ5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC127Q96BQ5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CCDC127Q96BQ5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC127Q96BQ5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 HLA-G-202ENST00000376815 851 ntBASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 HLA-G-203ENST00000376818 1127 ntBASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 HLA-B-256ENST00000639848 1089 ntBASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC127Q96BQ5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 BX119927.1-201ENST00000636596 1552 ntBASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CCDC127Q96BQ5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 RNA5SP413-201ENST00000516373 109 ntBASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 AC060766.5-201ENST00000590539 871 ntBASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 AC006557.6-201ENST00000623071 864 ntBASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC127Q96BQ5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 AL390719.1-204ENST00000412397 1219 ntBASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 PNMA6B-201ENST00000538162 1200 ntBASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 AC005829.2-201ENST00000571422 1056 ntBASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC127Q96BQ5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms