Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CROCCP3Q8IVE0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.08■□□□□ 0.49
CROCCP3Q8IVE0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.08■□□□□ 0.49
CROCCP3Q8IVE0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CROCCP3Q8IVE0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CROCCP3Q8IVE0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CROCCP3Q8IVE0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
CROCCP3Q8IVE0 AC009113.1-201ENST00000570267 2443 ntBASIC18.08■□□□□ 0.49
CROCCP3Q8IVE0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CROCCP3Q8IVE0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.08■□□□□ 0.48
CROCCP3Q8IVE0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CROCCP3Q8IVE0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CROCCP3Q8IVE0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CROCCP3Q8IVE0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.08■□□□□ 0.48
CROCCP3Q8IVE0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CROCCP3Q8IVE0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CROCCP3Q8IVE0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CROCCP3Q8IVE0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
CROCCP3Q8IVE0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CROCCP3Q8IVE0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CROCCP3Q8IVE0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.08■□□□□ 0.48
CROCCP3Q8IVE0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CROCCP3Q8IVE0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CROCCP3Q8IVE0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CROCCP3Q8IVE0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 AC139713.2-201ENST00000641328 2723 ntBASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CROCCP3Q8IVE0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.06■□□□□ 0.48
CROCCP3Q8IVE0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 TMEM179-206ENST00000616017 1645 ntBASIC18.05■□□□□ 0.48
CROCCP3Q8IVE0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms