Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
RAB43Q86YS6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RAB43Q86YS6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
RAB43Q86YS6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB43Q86YS6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB43Q86YS6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RAB43Q86YS6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB43Q86YS6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RAB43Q86YS6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB43Q86YS6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RAB43Q86YS6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB43Q86YS6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB43Q86YS6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RAB43Q86YS6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RAB43Q86YS6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB43Q86YS6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RAB43Q86YS6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.02■□□□□ 0.64
RAB43Q86YS6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RAB43Q86YS6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.02■□□□□ 0.64
RAB43Q86YS6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.02■□□□□ 0.64
RAB43Q86YS6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RAB43Q86YS6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.02■□□□□ 0.64
RAB43Q86YS6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
RAB43Q86YS6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RAB43Q86YS6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RAB43Q86YS6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.02■□□□□ 0.63
RAB43Q86YS6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
RAB43Q86YS6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.02■□□□□ 0.63
RAB43Q86YS6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.02■□□□□ 0.63
RAB43Q86YS6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.02■□□□□ 0.63
RAB43Q86YS6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.02■□□□□ 0.63
RAB43Q86YS6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB43Q86YS6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB43Q86YS6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB43Q86YS6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB43Q86YS6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB43Q86YS6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB43Q86YS6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB43Q86YS6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RAB43Q86YS6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.01■□□□□ 0.63
RAB43Q86YS6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB43Q86YS6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB43Q86YS6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.01■□□□□ 0.63
RAB43Q86YS6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB43Q86YS6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.01■□□□□ 0.63
RAB43Q86YS6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
RAB43Q86YS6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RAB43Q86YS6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB43Q86YS6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RAB43Q86YS6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.01■□□□□ 0.63
RAB43Q86YS6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
RAB43Q86YS6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB43Q86YS6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB43Q86YS6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB43Q86YS6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB43Q86YS6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RAB43Q86YS6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB43Q86YS6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RAB43Q86YS6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RAB43Q86YS6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RAB43Q86YS6 AL596275.1-201ENST00000423464 877 ntBASIC19■□□□□ 0.63
RAB43Q86YS6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19■□□□□ 0.63
RAB43Q86YS6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19■□□□□ 0.63
RAB43Q86YS6 AC005829.2-201ENST00000571422 1056 ntBASIC19■□□□□ 0.63
RAB43Q86YS6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19■□□□□ 0.63
RAB43Q86YS6 AC233263.1-201ENST00000578059 224 ntBASIC19■□□□□ 0.63
RAB43Q86YS6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19■□□□□ 0.63
RAB43Q86YS6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB43Q86YS6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB43Q86YS6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB43Q86YS6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19■□□□□ 0.63
RAB43Q86YS6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB43Q86YS6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB43Q86YS6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB43Q86YS6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB43Q86YS6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB43Q86YS6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19■□□□□ 0.63
RAB43Q86YS6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RAB43Q86YS6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB43Q86YS6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.99■□□□□ 0.63
RAB43Q86YS6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAB43Q86YS6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB43Q86YS6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB43Q86YS6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAB43Q86YS6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RAB43Q86YS6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.99■□□□□ 0.63
RAB43Q86YS6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RAB43Q86YS6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB43Q86YS6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.99■□□□□ 0.63
RAB43Q86YS6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB43Q86YS6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAB43Q86YS6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB43Q86YS6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.99■□□□□ 0.63
RAB43Q86YS6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB43Q86YS6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.99■□□□□ 0.63
RAB43Q86YS6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RAB43Q86YS6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.99■□□□□ 0.63
RAB43Q86YS6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.99■□□□□ 0.63
RAB43Q86YS6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB43Q86YS6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms