Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
LRRC28Q86X40 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC28Q86X40 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC28Q86X40 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC28Q86X40 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.73■□□□□ 0.43
LRRC28Q86X40 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC28Q86X40 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC28Q86X40 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRC28Q86X40 BID-214ENST00000617586 542 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRC28Q86X40 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC28Q86X40 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LRRC28Q86X40 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRC28Q86X40 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC28Q86X40 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LRRC28Q86X40 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC28Q86X40 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC28Q86X40 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
LRRC28Q86X40 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.72■□□□□ 0.43
LRRC28Q86X40 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC28Q86X40 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC28Q86X40 AC080038.1-201ENST00000611274 1154 ntBASIC17.72■□□□□ 0.43
LRRC28Q86X40 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.72■□□□□ 0.43
LRRC28Q86X40 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC28Q86X40 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC28Q86X40 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC28Q86X40 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC28Q86X40 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC28Q86X40 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC28Q86X40 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRC28Q86X40 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC28Q86X40 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC28Q86X40 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC28Q86X40 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LRRC28Q86X40 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC28Q86X40 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC28Q86X40 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC28Q86X40 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRC28Q86X40 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.71■□□□□ 0.43
LRRC28Q86X40 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
LRRC28Q86X40 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC28Q86X40 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRC28Q86X40 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC28Q86X40 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC28Q86X40 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC28Q86X40 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRRC28Q86X40 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRRC28Q86X40 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LRRC28Q86X40 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC28Q86X40 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LRRC28Q86X40 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC28Q86X40 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC28Q86X40 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC28Q86X40 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
LRRC28Q86X40 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC28Q86X40 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC28Q86X40 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC28Q86X40 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LRRC28Q86X40 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC28Q86X40 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.7■□□□□ 0.42
LRRC28Q86X40 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC28Q86X40 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC28Q86X40 AC090192.1-201ENST00000517740 490 ntBASIC17.7■□□□□ 0.42
LRRC28Q86X40 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LRRC28Q86X40 AC011767.1-201ENST00000617410 1153 ntBASIC17.7■□□□□ 0.42
LRRC28Q86X40 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC28Q86X40 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC28Q86X40 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC28Q86X40 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC28Q86X40 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC28Q86X40 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC28Q86X40 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC28Q86X40 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC28Q86X40 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC28Q86X40 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC28Q86X40 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC28Q86X40 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC28Q86X40 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC28Q86X40 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LRRC28Q86X40 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms