Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 AC007225.1-201ENST00000566331 1836 ntBASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDPF1Q6NVV7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 AL513477.1-201ENST00000602865 2407 ntBASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 SRD5A1P1-201ENST00000442297 786 ntBASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 AC104564.3-201ENST00000582367 638 ntBASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 AC106739.1-201ENST00000617035 715 ntBASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDPF1Q6NVV7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 AC079416.2-201ENST00000625035 1193 ntBASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.14■□□□□ 0.01
CDPF1Q6NVV7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDPF1Q6NVV7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDPF1Q6NVV7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CDPF1Q6NVV7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CDPF1Q6NVV7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDPF1Q6NVV7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDPF1Q6NVV7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDPF1Q6NVV7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms