Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VMA21Q3ZAQ7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VMA21Q3ZAQ7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.14■□□□□ 0.17
VMA21Q3ZAQ7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VMA21Q3ZAQ7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.14■□□□□ 0.17
VMA21Q3ZAQ7 KRT18P68-201ENST00000392293 1000 ntBASIC16.14■□□□□ 0.17
VMA21Q3ZAQ7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.14■□□□□ 0.17
VMA21Q3ZAQ7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VMA21Q3ZAQ7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VMA21Q3ZAQ7 AC105020.6-201ENST00000621523 1217 ntBASIC16.14■□□□□ 0.17
VMA21Q3ZAQ7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VMA21Q3ZAQ7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VMA21Q3ZAQ7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.14■□□□□ 0.17
VMA21Q3ZAQ7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VMA21Q3ZAQ7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
VMA21Q3ZAQ7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 OR10C1-204ENST00000622521 1039 ntBASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 BX119927.1-201ENST00000636596 1552 ntBASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
VMA21Q3ZAQ7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 AC022517.1-201ENST00000592429 346 ntBASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 CYP2T3P-201ENST00000601990 817 ntBASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VMA21Q3ZAQ7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 AL589743.5-201ENST00000616611 1050 ntBASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VMA21Q3ZAQ7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
VMA21Q3ZAQ7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VMA21Q3ZAQ7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms