Protein–RNA interactions for Protein: Q08831

VTS1, Protein VTS1, yeastyeast

Known RBP RIP-Chip data

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTS1Q08831 YHR214C-BYHR214C-B 5382 nt1.64□□□□□ -2.15
VTS1Q08831 SAC3YDR159W 3906 nt1.64□□□□□ -2.15
VTS1Q08831 YNL266WYNL266W 420 nt1.64□□□□□ -2.15
VTS1Q08831 snR45snR45 172 nt1.64□□□□□ -2.15
VTS1Q08831 SEC1YDR164C 2175 nt1.64□□□□□ -2.15
VTS1Q08831 WAR1YML076C 2835 nt1.63□□□□□ -2.15
VTS1Q08831 tT(UGU)HtT(UGU)H 72 nt1.63□□□□□ -2.15
VTS1Q08831 SEC3YER008C 4011 nt1.63□□□□□ -2.15
VTS1Q08831 YBR072C-AYBR072C-A 162 nt1.62□□□□□ -2.15
VTS1Q08831 TMA7YLR262C-A 195 nt1.61□□□□□ -2.15
VTS1Q08831 SWI4YER111C 3282 nt1.61□□□□□ -2.15
VTS1Q08831 TFC3YAL001C 3483 nt1.6□□□□□ -2.15
VTS1Q08831 CHS1YNL192W 3396 nt1.6□□□□□ -2.15
VTS1Q08831 FKS1YLR342W 5631 nt1.6□□□□□ -2.15
VTS1Q08831 VPS15YBR097W 4365 nt1.59□□□□□ -2.16
VTS1Q08831 APL3YBL037W 3078 nt1.59□□□□□ -2.16
VTS1Q08831 YDL073WYDL073W 2955 nt1.58□□□□□ -2.16
VTS1Q08831 BPH1YCR032W 6504 nt1.58□□□□□ -2.16
VTS1Q08831 YMR247W-AYMR247W-A 144 nt1.58□□□□□ -2.16
VTS1Q08831 MON2YNL297C 4911 nt1.58□□□□□ -2.16
VTS1Q08831 TRM732YMR259C 4263 nt1.56□□□□□ -2.16
VTS1Q08831 FIG2YCR089W 4830 nt1.56□□□□□ -2.16
VTS1Q08831 snR62snR62 100 nt1.56□□□□□ -2.16
VTS1Q08831 BRE1YDL074C 2103 nt1.56□□□□□ -2.16
VTS1Q08831 YBR200W-AYBR200W-A 165 nt1.56□□□□□ -2.16
VTS1Q08831 FAB1YFR019W 6837 nt1.56□□□□□ -2.16
VTS1Q08831 NUP145YGL092W 3954 nt1.56□□□□□ -2.16
VTS1Q08831 UTP22YGR090W 3714 nt1.54□□□□□ -2.16
VTS1Q08831 GEA2YEL022W 4380 nt1.54□□□□□ -2.16
VTS1Q08831 SEC8YPR055W 3198 nt1.53□□□□□ -2.16
VTS1Q08831 PKH3YDR466W 2697 nt1.52□□□□□ -2.17
VTS1Q08831 PEP1YBL017C 4740 nt1.51□□□□□ -2.17
VTS1Q08831 CLU1YMR012W 3834 nt1.51□□□□□ -2.17
VTS1Q08831 BST1YFL025C 3090 nt1.51□□□□□ -2.17
VTS1Q08831 YLR399W-AYLR399W-A 105 nt1.49□□□□□ -2.17
VTS1Q08831 YOL083C-AYOL083C-A 141 nt1.49□□□□□ -2.17
VTS1Q08831 PRP16YKR086W 3216 nt1.49□□□□□ -2.17
VTS1Q08831 PMD1YER132C 5262 nt1.47□□□□□ -2.17
VTS1Q08831 NUP188YML103C 4968 nt1.47□□□□□ -2.17
VTS1Q08831 YBL071C-BYBL071C-B 99 nt1.46□□□□□ -2.18
VTS1Q08831 YBR196C-AYBR196C-A 150 nt1.46□□□□□ -2.18
VTS1Q08831 BEM3YPL115C 3387 nt1.46□□□□□ -2.18
VTS1Q08831 AZF1YOR113W 2745 nt1.46□□□□□ -2.18
VTS1Q08831 YPR160W-AYPR160W-A 81 nt1.45□□□□□ -2.18
VTS1Q08831 EST2YLR318W 2655 nt1.44□□□□□ -2.18
VTS1Q08831 YSP1YHR155W 3687 nt1.44□□□□□ -2.18
VTS1Q08831 tN(GUU)QtN(GUU)Q 71 nt1.43□□□□□ -2.18
VTS1Q08831 NNF2YGR089W 2811 nt1.43□□□□□ -2.18
VTS1Q08831 CFT1YDR301W 4074 nt1.42□□□□□ -2.18
VTS1Q08831 CDC39YCR093W 6327 nt1.42□□□□□ -2.18
VTS1Q08831 MSN5YDR335W 3675 nt1.42□□□□□ -2.18
VTS1Q08831 RPS26AYGL189C 360 nt1.42□□□□□ -2.18
VTS1Q08831 DNF3YMR162C 4971 nt1.41□□□□□ -2.18
VTS1Q08831 SEC10YLR166C 2616 nt1.41□□□□□ -2.18
VTS1Q08831 UBP3YER151C 2739 nt1.4□□□□□ -2.18
VTS1Q08831 ULP2YIL031W 3105 nt1.4□□□□□ -2.18
VTS1Q08831 YOR093CYOR093C 4947 nt1.39□□□□□ -2.19
VTS1Q08831 GLG1YKR058W 1851 nt1.39□□□□□ -2.19 RIP-Chip
VTS1Q08831 YBL100W-CYBL100W-C 120 nt1.37□□□□□ -2.19
VTS1Q08831 MSH3YCR092C 3057 nt1.36□□□□□ -2.19
VTS1Q08831 YOL164W-AYOL164W-A 183 nt1.36□□□□□ -2.19
VTS1Q08831 YDR034C-AYDR034C-A 177 nt1.35□□□□□ -2.19
VTS1Q08831 PIK1YNL267W 3201 nt1.35□□□□□ -2.19
VTS1Q08831 PET127YOR017W 2403 nt1.34□□□□□ -2.19
VTS1Q08831 SSK2YNR031C 4740 nt1.34□□□□□ -2.2
VTS1Q08831 IRA1YBR140C 9279 nt1.34□□□□□ -2.2
VTS1Q08831 MEC1YBR136W 7107 nt1.33□□□□□ -2.2
VTS1Q08831 YPL060C-AYPL060C-A 3315 nt1.32□□□□□ -2.2
VTS1Q08831 SXM1YDR395W 2835 nt1.32□□□□□ -2.2
VTS1Q08831 YGR240C-AYGR240C-A 201 nt1.32□□□□□ -2.2
VTS1Q08831 YLR286W-AYLR286W-A 135 nt1.32□□□□□ -2.2
VTS1Q08831 FYV8YGR196C 2454 nt1.31□□□□□ -2.2
VTS1Q08831 ANS1YHR126C 480 nt1.29□□□□□ -2.2
VTS1Q08831 CCH1YGR217W 6120 nt1.28□□□□□ -2.2
VTS1Q08831 SPC110YDR356W 2835 nt1.28□□□□□ -2.2
VTS1Q08831 tD(GUC)QtD(GUC)Q 75 nt1.27□□□□□ -2.21
VTS1Q08831 YMR272W-BYMR272W-B 108 nt1.26□□□□□ -2.21
VTS1Q08831 NUP192YJL039C 5052 nt1.25□□□□□ -2.21
VTS1Q08831 tQ(UUG)E2tQ(UUG)E2 72 nt1.24□□□□□ -2.21
VTS1Q08831 EST1YLR233C 2100 nt1.24□□□□□ -2.21
VTS1Q08831 HKR1YDR420W 5409 nt1.23□□□□□ -2.21 RIP-Chip
VTS1Q08831 LAA1YJL207C 6045 nt1.23□□□□□ -2.21
VTS1Q08831 snR69snR69 101 nt1.23□□□□□ -2.21
VTS1Q08831 NST1YNL091W 3723 nt1.22□□□□□ -2.21
VTS1Q08831 CSE1YGL238W 2883 nt1.22□□□□□ -2.21
VTS1Q08831 YNL284C-BYNL284C-B 5268 nt1.22□□□□□ -2.21
VTS1Q08831 YGR130CYGR130C 2451 nt1.22□□□□□ -2.21
VTS1Q08831 snR47snR47 99 nt1.21□□□□□ -2.22
VTS1Q08831 YLR299C-AYLR299C-A 93 nt1.2□□□□□ -2.22
VTS1Q08831 ORC3YLL004W 1851 nt1.2□□□□□ -2.22
VTS1Q08831 YLL006W-AYLL006W-A 177 nt1.19□□□□□ -2.22
VTS1Q08831 HUG1YML058W-A 207 nt1.18□□□□□ -2.22
VTS1Q08831 SPT7YBR081C 3999 nt1.16□□□□□ -2.22
VTS1Q08831 YDL159C-BYDL159C-B 177 nt1.16□□□□□ -2.22
VTS1Q08831 RDS3YPR094W 324 nt1.16□□□□□ -2.22
VTS1Q08831 BRR2YER172C 6492 nt1.15□□□□□ -2.22
VTS1Q08831 CAT8YMR280C 4302 nt1.15□□□□□ -2.22
VTS1Q08831 YJL077W-AYJL077W-A 87 nt1.14□□□□□ -2.23
VTS1Q08831 NIP1YMR309C 2439 nt1.13□□□□□ -2.23
VTS1Q08831 snR53snR53 91 nt1.12□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 28.5 ms