Protein–RNA interactions for Protein: Q08236

AVO1, Target of rapamycin complex 2 subunit AVO1, yeastyeast

Predictions only

Length 1,176 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AVO1Q08236 FKS1YLR342W 5631 nt1.83□□□□□ -2.12
AVO1Q08236 BIR1YJR089W 2865 nt1.83□□□□□ -2.12
AVO1Q08236 SEC3YER008C 4011 nt1.82□□□□□ -2.12
AVO1Q08236 snR190snR190 190 nt1.82□□□□□ -2.12
AVO1Q08236 IRC20YLR247C 4671 nt1.82□□□□□ -2.12
AVO1Q08236 STO1YMR125W 2586 nt1.81□□□□□ -2.12
AVO1Q08236 YAL037C-AYAL037C-A 93 nt1.81□□□□□ -2.12
AVO1Q08236 YJL127W-AYJL127W-A 117 nt1.8□□□□□ -2.12
AVO1Q08236 SEC1YDR164C 2175 nt1.8□□□□□ -2.12
AVO1Q08236 MON2YNL297C 4911 nt1.79□□□□□ -2.12
AVO1Q08236 YGR146C-AYGR146C-A 162 nt1.79□□□□□ -2.12
AVO1Q08236 YNL266WYNL266W 420 nt1.79□□□□□ -2.12
AVO1Q08236 BPH1YCR032W 6504 nt1.79□□□□□ -2.12
AVO1Q08236 CDC25YLR310C 4770 nt1.78□□□□□ -2.12
AVO1Q08236 RPL26BYGR034W 384 nt1.78□□□□□ -2.12
AVO1Q08236 YBR072C-AYBR072C-A 162 nt1.78□□□□□ -2.12
AVO1Q08236 VPS15YBR097W 4365 nt1.78□□□□□ -2.12
AVO1Q08236 SMC1YFL008W 3678 nt1.78□□□□□ -2.13
AVO1Q08236 FAB1YFR019W 6837 nt1.77□□□□□ -2.13
AVO1Q08236 SAC3YDR159W 3906 nt1.77□□□□□ -2.13
AVO1Q08236 APL3YBL037W 3078 nt1.76□□□□□ -2.13
AVO1Q08236 SWI4YER111C 3282 nt1.76□□□□□ -2.13
AVO1Q08236 WAR1YML076C 2835 nt1.76□□□□□ -2.13
AVO1Q08236 snR62snR62 100 nt1.72□□□□□ -2.13
AVO1Q08236 PEP1YBL017C 4740 nt1.72□□□□□ -2.13
AVO1Q08236 PIK1YNL267W 3201 nt1.71□□□□□ -2.14
AVO1Q08236 SXM1YDR395W 2835 nt1.71□□□□□ -2.14
AVO1Q08236 CHS1YNL192W 3396 nt1.7□□□□□ -2.14
AVO1Q08236 SSK2YNR031C 4740 nt1.69□□□□□ -2.14
AVO1Q08236 PRP16YKR086W 3216 nt1.68□□□□□ -2.14
AVO1Q08236 PMD1YER132C 5262 nt1.67□□□□□ -2.14
AVO1Q08236 NUP145YGL092W 3954 nt1.66□□□□□ -2.14
AVO1Q08236 YMR272W-BYMR272W-B 108 nt1.66□□□□□ -2.14
AVO1Q08236 YBR200W-AYBR200W-A 165 nt1.66□□□□□ -2.14
AVO1Q08236 GEA2YEL022W 4380 nt1.66□□□□□ -2.14
AVO1Q08236 YBL071C-BYBL071C-B 99 nt1.65□□□□□ -2.15
AVO1Q08236 MSH3YCR092C 3057 nt1.65□□□□□ -2.15
AVO1Q08236 SEC8YPR055W 3198 nt1.64□□□□□ -2.15
AVO1Q08236 NUP188YML103C 4968 nt1.64□□□□□ -2.15
AVO1Q08236 YOL083C-AYOL083C-A 141 nt1.64□□□□□ -2.15
AVO1Q08236 CDC39YCR093W 6327 nt1.63□□□□□ -2.15
AVO1Q08236 YPL060C-AYPL060C-A 3315 nt1.63□□□□□ -2.15
AVO1Q08236 AZF1YOR113W 2745 nt1.63□□□□□ -2.15
AVO1Q08236 FIG2YCR089W 4830 nt1.63□□□□□ -2.15
AVO1Q08236 NNF2YGR089W 2811 nt1.62□□□□□ -2.15
AVO1Q08236 BST1YFL025C 3090 nt1.62□□□□□ -2.15
AVO1Q08236 RPS26AYGL189C 360 nt1.6□□□□□ -2.15
AVO1Q08236 YLR399W-AYLR399W-A 105 nt1.6□□□□□ -2.15
AVO1Q08236 YPR160W-AYPR160W-A 81 nt1.6□□□□□ -2.15
AVO1Q08236 YOR093CYOR093C 4947 nt1.6□□□□□ -2.15
AVO1Q08236 MSN5YDR335W 3675 nt1.59□□□□□ -2.15
AVO1Q08236 tN(GUU)QtN(GUU)Q 71 nt1.59□□□□□ -2.15
AVO1Q08236 CFT1YDR301W 4074 nt1.59□□□□□ -2.15
AVO1Q08236 CLU1YMR012W 3834 nt1.58□□□□□ -2.16
AVO1Q08236 YBR196C-AYBR196C-A 150 nt1.58□□□□□ -2.16
AVO1Q08236 EST2YLR318W 2655 nt1.57□□□□□ -2.16
AVO1Q08236 PET127YOR017W 2403 nt1.57□□□□□ -2.16
AVO1Q08236 FYV8YGR196C 2454 nt1.57□□□□□ -2.16
AVO1Q08236 SPC110YDR356W 2835 nt1.56□□□□□ -2.16
AVO1Q08236 UBP3YER151C 2739 nt1.55□□□□□ -2.16
AVO1Q08236 YSP1YHR155W 3687 nt1.54□□□□□ -2.16
AVO1Q08236 SEC10YLR166C 2616 nt1.54□□□□□ -2.16
AVO1Q08236 IRA1YBR140C 9279 nt1.53□□□□□ -2.16
AVO1Q08236 REV3YPL167C 4515 nt1.53□□□□□ -2.16
AVO1Q08236 ULP2YIL031W 3105 nt1.53□□□□□ -2.17
AVO1Q08236 MEC1YBR136W 7107 nt1.5□□□□□ -2.17
AVO1Q08236 YOL164W-AYOL164W-A 183 nt1.5□□□□□ -2.17
AVO1Q08236 BEM3YPL115C 3387 nt1.5□□□□□ -2.17
AVO1Q08236 YDR034C-AYDR034C-A 177 nt1.49□□□□□ -2.17
AVO1Q08236 GLG1YKR058W 1851 nt1.49□□□□□ -2.17
AVO1Q08236 DNF3YMR162C 4971 nt1.47□□□□□ -2.17
AVO1Q08236 YGR240C-AYGR240C-A 201 nt1.46□□□□□ -2.18
AVO1Q08236 YLR286W-AYLR286W-A 135 nt1.46□□□□□ -2.18
AVO1Q08236 HKR1YDR420W 5409 nt1.46□□□□□ -2.18
AVO1Q08236 YBL100W-CYBL100W-C 120 nt1.45□□□□□ -2.18
AVO1Q08236 BRR2YER172C 6492 nt1.44□□□□□ -2.18
AVO1Q08236 NST1YNL091W 3723 nt1.42□□□□□ -2.18
AVO1Q08236 CAT8YMR280C 4302 nt1.42□□□□□ -2.18
AVO1Q08236 LAA1YJL207C 6045 nt1.41□□□□□ -2.18
AVO1Q08236 NUP192YJL039C 5052 nt1.4□□□□□ -2.18
AVO1Q08236 tD(GUC)QtD(GUC)Q 75 nt1.39□□□□□ -2.19
AVO1Q08236 tQ(UUG)E2tQ(UUG)E2 72 nt1.39□□□□□ -2.19
AVO1Q08236 ORC3YLL004W 1851 nt1.39□□□□□ -2.19
AVO1Q08236 ANS1YHR126C 480 nt1.38□□□□□ -2.19
AVO1Q08236 EST1YLR233C 2100 nt1.37□□□□□ -2.19
AVO1Q08236 CCH1YGR217W 6120 nt1.36□□□□□ -2.19
AVO1Q08236 snR69snR69 101 nt1.35□□□□□ -2.19
AVO1Q08236 snR47snR47 99 nt1.34□□□□□ -2.19
AVO1Q08236 CSE1YGL238W 2883 nt1.33□□□□□ -2.2
AVO1Q08236 YGR130CYGR130C 2451 nt1.33□□□□□ -2.2
AVO1Q08236 YLR299C-AYLR299C-A 93 nt1.3□□□□□ -2.2
AVO1Q08236 BUL2YML111W 2763 nt1.29□□□□□ -2.2
AVO1Q08236 YLL006W-AYLL006W-A 177 nt1.28□□□□□ -2.2
AVO1Q08236 SPT7YBR081C 3999 nt1.27□□□□□ -2.21
AVO1Q08236 YDL159C-BYDL159C-B 177 nt1.26□□□□□ -2.21
AVO1Q08236 RDS3YPR094W 324 nt1.26□□□□□ -2.21
AVO1Q08236 snR53snR53 91 nt1.26□□□□□ -2.21
AVO1Q08236 HUG1YML058W-A 207 nt1.25□□□□□ -2.21
AVO1Q08236 NIP1YMR309C 2439 nt1.24□□□□□ -2.21
AVO1Q08236 YNL284C-BYNL284C-B 5268 nt1.21□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms