Protein–RNA interactions for Protein: Q04693

RSE1, Pre-mRNA-splicing factor RSE1, yeastyeast

Known RBP Predictions only

Length 1,361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSE1Q04693 YDL159C-BYDL159C-B 177 nt3.61□□□□□ -1.83
RSE1Q04693 UBR1YGR184C 5853 nt3.6□□□□□ -1.83
RSE1Q04693 NUP192YJL039C 5052 nt3.59□□□□□ -1.84
RSE1Q04693 SAC3YDR159W 3906 nt3.58□□□□□ -1.84
RSE1Q04693 PEP1YBL017C 4740 nt3.58□□□□□ -1.84
RSE1Q04693 PET309YLR067C 2898 nt3.57□□□□□ -1.84
RSE1Q04693 BEM3YPL115C 3387 nt3.57□□□□□ -1.84
RSE1Q04693 HSL1YKL101W 4557 nt3.56□□□□□ -1.84
RSE1Q04693 YML054C-AYML054C-A 159 nt3.56□□□□□ -1.84
RSE1Q04693 NUM1YDR150W 8247 nt3.55□□□□□ -1.84
RSE1Q04693 YDR209CYDR209C 414 nt3.53□□□□□ -1.84
RSE1Q04693 HIR3YJR140C 4947 nt3.52□□□□□ -1.85
RSE1Q04693 YJL052C-AYJL052C-A 120 nt3.52□□□□□ -1.85
RSE1Q04693 STH1YIL126W 4080 nt3.52□□□□□ -1.85
RSE1Q04693 RAV1YJR033C 4074 nt3.52□□□□□ -1.85
RSE1Q04693 YOR343W-BYOR343W-B 5313 nt3.52□□□□□ -1.85
RSE1Q04693 EST1YLR233C 2100 nt3.52□□□□□ -1.85
RSE1Q04693 SEC31YDL195W 3822 nt3.51□□□□□ -1.85
RSE1Q04693 MSH6YDR097C 3729 nt3.5□□□□□ -1.85
RSE1Q04693 ECM29YHL030W 5607 nt3.5□□□□□ -1.85
RSE1Q04693 MOT1YPL082C 5604 nt3.5□□□□□ -1.85
RSE1Q04693 GEA1YJR031C 4227 nt3.5□□□□□ -1.85
RSE1Q04693 YPR160W-AYPR160W-A 81 nt3.49□□□□□ -1.85
RSE1Q04693 CHC1YGL206C 4962 nt3.48□□□□□ -1.85
RSE1Q04693 ESC1YMR219W 4977 nt3.48□□□□□ -1.85
RSE1Q04693 YHR086W-AYHR086W-A 162 nt3.47□□□□□ -1.85
RSE1Q04693 PET111YMR257C 2403 nt3.46□□□□□ -1.86
RSE1Q04693 UTP21YLR409C 2820 nt3.46□□□□□ -1.86
RSE1Q04693 FYV8YGR196C 2454 nt3.45□□□□□ -1.86
RSE1Q04693 RTT101YJL047C 2529 nt3.45□□□□□ -1.86
RSE1Q04693 snR69snR69 101 nt3.43□□□□□ -1.86
RSE1Q04693 YLR422WYLR422W 5799 nt3.43□□□□□ -1.86
RSE1Q04693 YOL098CYOL098C 3114 nt3.42□□□□□ -1.86
RSE1Q04693 RAD50YNL250W 3939 nt3.41□□□□□ -1.86
RSE1Q04693 NST1YNL091W 3723 nt3.41□□□□□ -1.86
RSE1Q04693 EMC5YIL027C 426 nt3.39□□□□□ -1.87
RSE1Q04693 DNF1YER166W 4716 nt3.39□□□□□ -1.87
RSE1Q04693 YPL060C-AYPL060C-A 3315 nt3.39□□□□□ -1.87
RSE1Q04693 FAR11YNL127W 2862 nt3.39□□□□□ -1.87
RSE1Q04693 RDS3YPR094W 324 nt3.38□□□□□ -1.87
RSE1Q04693 HER1YOR227W 3741 nt3.38□□□□□ -1.87
RSE1Q04693 SEC16YPL085W 6588 nt3.37□□□□□ -1.87
RSE1Q04693 CYR1YJL005W 6081 nt3.37□□□□□ -1.87
RSE1Q04693 ULP2YIL031W 3105 nt3.37□□□□□ -1.87
RSE1Q04693 TFC3YAL001C 3483 nt3.35□□□□□ -1.87
RSE1Q04693 YCS4YLR272C 3531 nt3.35□□□□□ -1.87
RSE1Q04693 CDC25YLR310C 4770 nt3.31□□□□□ -1.88
RSE1Q04693 PMD1YER132C 5262 nt3.3□□□□□ -1.88
RSE1Q04693 SLH1YGR271W 5904 nt3.3□□□□□ -1.88
RSE1Q04693 KOG1YHR186C 4674 nt3.3□□□□□ -1.88
RSE1Q04693 CSE1YGL238W 2883 nt3.29□□□□□ -1.88
RSE1Q04693 BRR2YER172C 6492 nt3.28□□□□□ -1.88
RSE1Q04693 YSP1YHR155W 3687 nt3.27□□□□□ -1.89
RSE1Q04693 TOP2YNL088W 4287 nt3.27□□□□□ -1.89
RSE1Q04693 SEC8YPR055W 3198 nt3.27□□□□□ -1.89
RSE1Q04693 snR14snR14 160 nt3.26□□□□□ -1.89
RSE1Q04693 TRA1YHR099W 11235 nt3.26□□□□□ -1.89
RSE1Q04693 PRP16YKR086W 3216 nt3.25□□□□□ -1.89
RSE1Q04693 FAB1YFR019W 6837 nt3.24□□□□□ -1.89
RSE1Q04693 KAP122YGL016W 3246 nt3.24□□□□□ -1.89
RSE1Q04693 CSF1YLR087C 8877 nt3.24□□□□□ -1.89
RSE1Q04693 EST2YLR318W 2655 nt3.24□□□□□ -1.89
RSE1Q04693 STO1YMR125W 2586 nt3.24□□□□□ -1.89
RSE1Q04693 FKS1YLR342W 5631 nt3.23□□□□□ -1.89
RSE1Q04693 CLU1YMR012W 3834 nt3.23□□□□□ -1.89
RSE1Q04693 NEO1YIL048W 3456 nt3.22□□□□□ -1.89
RSE1Q04693 tN(GUU)QtN(GUU)Q 71 nt3.22□□□□□ -1.89
RSE1Q04693 YGR130CYGR130C 2451 nt3.21□□□□□ -1.89
RSE1Q04693 SEC3YER008C 4011 nt3.21□□□□□ -1.9
RSE1Q04693 SPF1YEL031W 3648 nt3.19□□□□□ -1.9
RSE1Q04693 SPP41YDR464W 4308 nt3.18□□□□□ -1.9
RSE1Q04693 MSH3YCR092C 3057 nt3.18□□□□□ -1.9
RSE1Q04693 YLR399W-AYLR399W-A 105 nt3.17□□□□□ -1.9
RSE1Q04693 MSN5YDR335W 3675 nt3.17□□□□□ -1.9
RSE1Q04693 YLR419WYLR419W 4308 nt3.15□□□□□ -1.91
RSE1Q04693 KCS1YDR017C 3153 nt3.14□□□□□ -1.91
RSE1Q04693 YMR272W-BYMR272W-B 108 nt3.13□□□□□ -1.91
RSE1Q04693 GEA2YEL022W 4380 nt3.13□□□□□ -1.91
RSE1Q04693 DGR1YNL130C-A 147 nt3.12□□□□□ -1.91
RSE1Q04693 TOM1YDR457W 9807 nt3.11□□□□□ -1.91
RSE1Q04693 YJL077W-AYJL077W-A 87 nt3.11□□□□□ -1.91
RSE1Q04693 DNF3YMR162C 4971 nt3.1□□□□□ -1.91
RSE1Q04693 SMC4YLR086W 4257 nt3.09□□□□□ -1.91
RSE1Q04693 tF(GAA)BtF(GAA)B 73 nt3.08□□□□□ -1.92
RSE1Q04693 tF(GAA)FtF(GAA)F 73 nt3.08□□□□□ -1.92
RSE1Q04693 tF(GAA)GtF(GAA)G 73 nt3.08□□□□□ -1.92
RSE1Q04693 tF(GAA)H1tF(GAA)H1 73 nt3.08□□□□□ -1.92
RSE1Q04693 tF(GAA)H2tF(GAA)H2 73 nt3.08□□□□□ -1.92
RSE1Q04693 tF(GAA)MtF(GAA)M 73 nt3.08□□□□□ -1.92
RSE1Q04693 tF(GAA)P1tF(GAA)P1 73 nt3.08□□□□□ -1.92
RSE1Q04693 tF(GAA)P2tF(GAA)P2 73 nt3.08□□□□□ -1.92
RSE1Q04693 SIP4YJL089W 2490 nt3.08□□□□□ -1.92
RSE1Q04693 BNI1YNL271C 5862 nt3.06□□□□□ -1.92
RSE1Q04693 TOR1YJR066W 7413 nt3.06□□□□□ -1.92
RSE1Q04693 UBP2YOR124C 3819 nt3.06□□□□□ -1.92
RSE1Q04693 YOR376W-AYOR376W-A 156 nt3.05□□□□□ -1.92
RSE1Q04693 CAT8YMR280C 4302 nt3.05□□□□□ -1.92
RSE1Q04693 UBR2YLR024C 5619 nt3.02□□□□□ -1.93
RSE1Q04693 BUL2YML111W 2763 nt3.01□□□□□ -1.93
RSE1Q04693 APL3YBL037W 3078 nt3□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 31.9 ms