Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 SSD1YDR293C 3753 nt2.03□□□□□ -2.08
TY1A-MR1Q04215 KIP1YBL063W 3336 nt2.03□□□□□ -2.08
TY1A-MR1Q04215 YHR180C-BYHR180C-B 105 nt2.02□□□□□ -2.09
TY1A-MR1Q04215 snR14snR14 160 nt2.02□□□□□ -2.09
TY1A-MR1Q04215 snR38snR38 95 nt2.02□□□□□ -2.09
TY1A-MR1Q04215 EMC5YIL027C 426 nt2.01□□□□□ -2.09
TY1A-MR1Q04215 AI1Q0050 2505 nt2.01□□□□□ -2.09
TY1A-MR1Q04215 SIR4YDR227W 4077 nt2.01□□□□□ -2.09
TY1A-MR1Q04215 EST1YLR233C 2100 nt2□□□□□ -2.09
TY1A-MR1Q04215 YHR180W-AYHR180W-A 183 nt2□□□□□ -2.09
TY1A-MR1Q04215 YML054C-AYML054C-A 159 nt2□□□□□ -2.09
TY1A-MR1Q04215 YPR160W-AYPR160W-A 81 nt2□□□□□ -2.09
TY1A-MR1Q04215 YBR296C-AYBR296C-A 120 nt2□□□□□ -2.09
TY1A-MR1Q04215 TFC3YAL001C 3483 nt2□□□□□ -2.09
TY1A-MR1Q04215 GEA2YEL022W 4380 nt2□□□□□ -2.09
TY1A-MR1Q04215 SAC3YDR159W 3906 nt1.99□□□□□ -2.09
TY1A-MR1Q04215 CSF1YLR087C 8877 nt1.99□□□□□ -2.09
TY1A-MR1Q04215 SEC16YPL085W 6588 nt1.98□□□□□ -2.09
TY1A-MR1Q04215 PET127YOR017W 2403 nt1.98□□□□□ -2.09
TY1A-MR1Q04215 STH1YIL126W 4080 nt1.97□□□□□ -2.09
TY1A-MR1Q04215 PKH3YDR466W 2697 nt1.97□□□□□ -2.09
TY1A-MR1Q04215 SLN1YIL147C 3663 nt1.97□□□□□ -2.09
TY1A-MR1Q04215 STO1YMR125W 2586 nt1.97□□□□□ -2.09
TY1A-MR1Q04215 ROM2YLR371W 4071 nt1.96□□□□□ -2.09
TY1A-MR1Q04215 SMC4YLR086W 4257 nt1.96□□□□□ -2.1
TY1A-MR1Q04215 SPP41YDR464W 4308 nt1.96□□□□□ -2.1
TY1A-MR1Q04215 PRP16YKR086W 3216 nt1.96□□□□□ -2.1
TY1A-MR1Q04215 UBR2YLR024C 5619 nt1.95□□□□□ -2.1
TY1A-MR1Q04215 snR69snR69 101 nt1.95□□□□□ -2.1
TY1A-MR1Q04215 DGR1YNL130C-A 147 nt1.95□□□□□ -2.1
TY1A-MR1Q04215 YBL005W-BYBL005W-B 5268 nt1.95□□□□□ -2.1
TY1A-MR1Q04215 BNI1YNL271C 5862 nt1.94□□□□□ -2.1
TY1A-MR1Q04215 MYO4YAL029C 4416 nt1.93□□□□□ -2.1
TY1A-MR1Q04215 NIP1YMR309C 2439 nt1.93□□□□□ -2.1
TY1A-MR1Q04215 HER1YOR227W 3741 nt1.93□□□□□ -2.1
TY1A-MR1Q04215 TDA9YML081W 3756 nt1.92□□□□□ -2.1
TY1A-MR1Q04215 tN(GUU)QtN(GUU)Q 71 nt1.91□□□□□ -2.1
TY1A-MR1Q04215 MBB1YJL199C 327 nt1.91□□□□□ -2.1
TY1A-MR1Q04215 KAP122YGL016W 3246 nt1.91□□□□□ -2.1
TY1A-MR1Q04215 DNA2YHR164C 4569 nt1.9□□□□□ -2.11
TY1A-MR1Q04215 SXM1YDR395W 2835 nt1.9□□□□□ -2.11
TY1A-MR1Q04215 RDS3YPR094W 324 nt1.9□□□□□ -2.11
TY1A-MR1Q04215 YMR045CYMR045C 5268 nt1.89□□□□□ -2.11
TY1A-MR1Q04215 YGL063C-AYGL063C-A 150 nt1.89□□□□□ -2.11
TY1A-MR1Q04215 UBP2YOR124C 3819 nt1.89□□□□□ -2.11
TY1A-MR1Q04215 CSE1YGL238W 2883 nt1.88□□□□□ -2.11
TY1A-MR1Q04215 SEC8YPR055W 3198 nt1.88□□□□□ -2.11
TY1A-MR1Q04215 TOR2YKL203C 7425 nt1.86□□□□□ -2.11
TY1A-MR1Q04215 USO1YDL058W 5373 nt1.86□□□□□ -2.11
TY1A-MR1Q04215 YLR422WYLR422W 5799 nt1.85□□□□□ -2.11
TY1A-MR1Q04215 UTP22YGR090W 3714 nt1.85□□□□□ -2.11
TY1A-MR1Q04215 ULP2YIL031W 3105 nt1.85□□□□□ -2.11
TY1A-MR1Q04215 YSP1YHR155W 3687 nt1.84□□□□□ -2.12
TY1A-MR1Q04215 APL3YBL037W 3078 nt1.83□□□□□ -2.12
TY1A-MR1Q04215 PET111YMR257C 2403 nt1.83□□□□□ -2.12
TY1A-MR1Q04215 YLR399W-AYLR399W-A 105 nt1.82□□□□□ -2.12
TY1A-MR1Q04215 FKS1YLR342W 5631 nt1.81□□□□□ -2.12
TY1A-MR1Q04215 snR70snR70 164 nt1.81□□□□□ -2.12
TY1A-MR1Q04215 tC(GCA)BtC(GCA)B 72 nt1.81□□□□□ -2.12
TY1A-MR1Q04215 tC(GCA)GtC(GCA)G 72 nt1.81□□□□□ -2.12
TY1A-MR1Q04215 tC(GCA)P1tC(GCA)P1 72 nt1.81□□□□□ -2.12
TY1A-MR1Q04215 tC(GCA)P2tC(GCA)P2 72 nt1.81□□□□□ -2.12
TY1A-MR1Q04215 HUG1YML058W-A 207 nt1.8□□□□□ -2.12
TY1A-MR1Q04215 IRC20YLR247C 4671 nt1.8□□□□□ -2.12
TY1A-MR1Q04215 SEC3YER008C 4011 nt1.78□□□□□ -2.12
TY1A-MR1Q04215 INO80YGL150C 4470 nt1.78□□□□□ -2.12
TY1A-MR1Q04215 SKI3YPR189W 4299 nt1.78□□□□□ -2.12
TY1A-MR1Q04215 NUP170YBL079W 4509 nt1.78□□□□□ -2.13
TY1A-MR1Q04215 MSH3YCR092C 3057 nt1.77□□□□□ -2.13
TY1A-MR1Q04215 NEO1YIL048W 3456 nt1.76□□□□□ -2.13
TY1A-MR1Q04215 SEC31YDL195W 3822 nt1.76□□□□□ -2.13
TY1A-MR1Q04215 KCS1YDR017C 3153 nt1.75□□□□□ -2.13
TY1A-MR1Q04215 PAU12YGR294W 363 nt1.75□□□□□ -2.13
TY1A-MR1Q04215 EST2YLR318W 2655 nt1.74□□□□□ -2.13
TY1A-MR1Q04215 MON2YNL297C 4911 nt1.74□□□□□ -2.13
TY1A-MR1Q04215 YCS4YLR272C 3531 nt1.73□□□□□ -2.13
TY1A-MR1Q04215 NST1YNL091W 3723 nt1.73□□□□□ -2.13
TY1A-MR1Q04215 YJL077W-AYJL077W-A 87 nt1.72□□□□□ -2.13
TY1A-MR1Q04215 SIP4YJL089W 2490 nt1.71□□□□□ -2.14
TY1A-MR1Q04215 CDC25YLR310C 4770 nt1.7□□□□□ -2.14
TY1A-MR1Q04215 PMD1YER132C 5262 nt1.7□□□□□ -2.14
TY1A-MR1Q04215 SWI4YER111C 3282 nt1.7□□□□□ -2.14
TY1A-MR1Q04215 YPL060C-AYPL060C-A 3315 nt1.69□□□□□ -2.14
TY1A-MR1Q04215 BUL2YML111W 2763 nt1.69□□□□□ -2.14
TY1A-MR1Q04215 tQ(UUG)QtQ(UUG)Q 76 nt1.69□□□□□ -2.14
TY1A-MR1Q04215 TMA7YLR262C-A 195 nt1.69□□□□□ -2.14
TY1A-MR1Q04215 ATG9YDL149W 2994 nt1.68□□□□□ -2.14
TY1A-MR1Q04215 MSN5YDR335W 3675 nt1.68□□□□□ -2.14
TY1A-MR1Q04215 YMR247W-AYMR247W-A 144 nt1.67□□□□□ -2.14
TY1A-MR1Q04215 FYV8YGR196C 2454 nt1.65□□□□□ -2.14
TY1A-MR1Q04215 NUP145YGL092W 3954 nt1.65□□□□□ -2.14
TY1A-MR1Q04215 TRM732YMR259C 4263 nt1.64□□□□□ -2.15
TY1A-MR1Q04215 YLL006W-AYLL006W-A 177 nt1.63□□□□□ -2.15
TY1A-MR1Q04215 NUP188YML103C 4968 nt1.63□□□□□ -2.15
TY1A-MR1Q04215 tT(UGU)HtT(UGU)H 72 nt1.61□□□□□ -2.15
TY1A-MR1Q04215 YOL019W-AYOL019W-A 153 nt1.6□□□□□ -2.15
TY1A-MR1Q04215 YHR214C-BYHR214C-B 5382 nt1.59□□□□□ -2.16
TY1A-MR1Q04215 CDC39YCR093W 6327 nt1.56□□□□□ -2.16
TY1A-MR1Q04215 YMR272W-BYMR272W-B 108 nt1.56□□□□□ -2.16
TY1A-MR1Q04215 YER090C-AYER090C-A 90 nt1.55□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 68.4 ms