Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 DDX42-207ENST00000578593 2919 ntTSL 27.05□□□□□ -1.282e-7■■□□□ 13.2
LSM11P83369 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.38□□□□□ -1.392e-7■■□□□ 13.2
LSM11P83369 DDX42-217ENST00000584010 3929 ntTSL 26.3□□□□□ -1.42e-7■■□□□ 13.2
LSM11P83369 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.675e-10■■□□□ 13.2
LSM11P83369 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.56■□□□□ 0.565e-10■■□□□ 13.2
LSM11P83369 TESC-203ENST00000470612 1057 ntTSL 217.96■□□□□ 0.475e-10■■□□□ 13.2
LSM11P83369 TESC-207ENST00000549210 422 ntTSL 216.45■□□□□ 0.225e-10■■□□□ 13.2
LSM11P83369 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.048e-7■■□□□ 13.2
LSM11P83369 STAT6-215ENST00000555222 2185 ntTSL 213.03□□□□□ -0.321e-7■■□□□ 13.2
LSM11P83369 STAT6-201ENST00000300134 4034 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.081e-7■■□□□ 13.2
LSM11P83369 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.926e-7■■□□□ 13.2
LSM11P83369 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.33■□□□□ 0.856e-7■■□□□ 13.2
LSM11P83369 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.756e-7■■□□□ 13.2
LSM11P83369 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.626e-7■■□□□ 13.2
LSM11P83369 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.446e-7■■□□□ 13.2
LSM11P83369 SPHK1-209ENST00000591762 2502 ntTSL 216.64■□□□□ 0.256e-7■■□□□ 13.2
LSM11P83369 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.62■□□□□ 0.735e-14■■□□□ 13.2
LSM11P83369 PRRC2B-208ENST00000465931 5366 ntTSL 210.62□□□□□ -0.712e-7■■□□□ 13.2
LSM11P83369 PRRC2B-201ENST00000320547 4950 ntTSL 210.38□□□□□ -0.752e-7■■□□□ 13.2
LSM11P83369 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.862e-7■■□□□ 13.2
LSM11P83369 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC9.23□□□□□ -0.932e-7■■□□□ 13.2
LSM11P83369 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.016e-7■■□□□ 13.2
LSM11P83369 PKP4-205ENST00000426248 4134 ntTSL 1 (best)14.63□□□□□ -0.071e-13■■□□□ 13.2
LSM11P83369 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.221e-29■■□□□ 13.2
LSM11P83369 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.971e-13■■□□□ 13.2
LSM11P83369 PKP4-210ENST00000480171 2772 ntTSL 28.15□□□□□ -1.11e-13■■□□□ 13.2
LSM11P83369 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.161e-13■■□□□ 13.2
LSM11P83369 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.15□□□□□ -1.261e-13■■□□□ 13.2
LSM11P83369 EML4-204ENST00000406175 4622 ntTSL 1 (best)5.17□□□□□ -1.581e-29■■□□□ 13.2
LSM11P83369 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.065e-7■■□□□ 13.2
LSM11P83369 NPEPL1-207ENST00000529976 4684 ntTSL 1 (best)14.6□□□□□ -0.075e-7■■□□□ 13.2
LSM11P83369 NPEPL1-206ENST00000527587 4633 ntTSL 514.01□□□□□ -0.175e-7■■□□□ 13.2
LSM11P83369 TRABD-205ENST00000463233 2404 ntTSL 1 (best)19.16■□□□□ 0.662e-6■■□□□ 13.2
LSM11P83369 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.492e-6■■□□□ 13.2
LSM11P83369 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.432e-6■■□□□ 13.2
LSM11P83369 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.372e-6■■□□□ 13.2
LSM11P83369 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.342e-6■■□□□ 13.2
LSM11P83369 ATP13A1-204ENST00000467160 2431 ntTSL 217.05■□□□□ 0.325e-10■■□□□ 13.2
LSM11P83369 PRR14-201ENST00000287463 2124 ntTSL 217.05■□□□□ 0.322e-6■■□□□ 13.2
LSM11P83369 PRR14-206ENST00000564946 2117 ntTSL 217.02■□□□□ 0.322e-6■■□□□ 13.2
LSM11P83369 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.12e-6■■□□□ 13.2
LSM11P83369 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.022e-6■■□□□ 13.2
LSM11P83369 AP000781.2-203ENST00000528835 533 ntTSL 314.76□□□□□ -0.051e-7■■□□□ 13.2
LSM11P83369 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.18□□□□□ -0.142e-6■■□□□ 13.2
LSM11P83369 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.142e-6■■□□□ 13.2
LSM11P83369 PRR14-208ENST00000565977 603 ntTSL 213.97□□□□□ -0.172e-6■■□□□ 13.2
LSM11P83369 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.222e-6■■□□□ 13.2
LSM11P83369 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.255e-10■■□□□ 13.2
LSM11P83369 ATP13A1-207ENST00000473243 4729 ntTSL 213.39□□□□□ -0.275e-10■■□□□ 13.2
LSM11P83369 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.96□□□□□ -0.332e-6■■□□□ 13.2
LSM11P83369 ATP13A1-214ENST00000497556 2442 ntTSL 212.91□□□□□ -0.345e-10■■□□□ 13.2
LSM11P83369 AP000781.2-201ENST00000534081 1639 ntTSL 212.59□□□□□ -0.391e-7■■□□□ 13.2
LSM11P83369 FAAP100-203ENST00000443656 3822 ntTSL 1 (best)12.47□□□□□ -0.412e-6■■□□□ 13.2
LSM11P83369 PRR14-210ENST00000567989 902 ntTSL 212□□□□□ -0.492e-6■■□□□ 13.2
LSM11P83369 ATP13A1-201ENST00000291503 3483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.755e-10■■□□□ 13.2
LSM11P83369 CTBP2-213ENST00000530930 425 ntTSL 510.33□□□□□ -0.762e-6■■□□□ 13.2
LSM11P83369 ATP13A1-205ENST00000469641 4241 ntTSL 29.66□□□□□ -0.865e-10■■□□□ 13.2
LSM11P83369 AP000781.2-202ENST00000529411 681 ntAPPRIS P1 TSL 4 BASIC9.37□□□□□ -0.911e-7■■□□□ 13.2
LSM11P83369 CHRD-209ENST00000461120 683 ntTSL 1 (best)12.31□□□□□ -0.446e-7■■□□□ 13.2
LSM11P83369 DUS2-215ENST00000575677 570 ntTSL 310.22□□□□□ -0.771e-6■■□□□ 13.2
LSM11P83369 DUS2-214ENST00000571081 570 ntTSL 49.85□□□□□ -0.831e-6■■□□□ 13.2
LSM11P83369 DUS2-213ENST00000570709 569 ntTSL 47.5□□□□□ -1.211e-6■■□□□ 13.2
LSM11P83369 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.658e-8■■□□□ 13.1
LSM11P83369 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.018e-8■■□□□ 13.1
LSM11P83369 ORMDL1-207ENST00000496543 723 ntTSL 311.4□□□□□ -0.588e-8■■□□□ 13.1
LSM11P83369 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.658e-8■■□□□ 13.1
LSM11P83369 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.63■□□□□ 0.572e-10■■□□□ 13.1
LSM11P83369 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.452e-10■■□□□ 13.1
LSM11P83369 PCID2-209ENST00000463102 599 ntTSL 213.17□□□□□ -0.32e-10■■□□□ 13.1
LSM11P83369 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.392e-10■■□□□ 13.1
LSM11P83369 PCID2-204ENST00000375459 1668 ntTSL 2 BASIC11.1□□□□□ -0.632e-10■■□□□ 13.1
LSM11P83369 PCID2-206ENST00000375479 1671 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.642e-10■■□□□ 13.1
LSM11P83369 PCID2-207ENST00000462653 669 ntTSL 1 (best)10.96□□□□□ -0.652e-10■■□□□ 13.1
LSM11P83369 PCID2-216ENST00000622406 1937 ntTSL 5 BASIC10.07□□□□□ -0.82e-10■■□□□ 13.1
LSM11P83369 PCID2-201ENST00000246505 1786 ntTSL 2 BASIC9.32□□□□□ -0.922e-10■■□□□ 13.1
LSM11P83369 PCID2-215ENST00000493650 4202 ntTSL 25.26□□□□□ -1.572e-10■■□□□ 13.1
LSM11P83369 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.685e-8■■□□□ 13.1
LSM11P83369 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.62□□□□□ -0.235e-8■■□□□ 13.1
LSM11P83369 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.66□□□□□ -0.385e-8■■□□□ 13.1
LSM11P83369 INPPL1-203ENST00000535985 353 ntTSL 210.69□□□□□ -0.75e-8■■□□□ 13.1
LSM11P83369 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.17□□□□□ -0.463e-6■■□□□ 13.1
LSM11P83369 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC9.77□□□□□ -0.843e-6■■□□□ 13.1
LSM11P83369 ECHDC2-210ENST00000479593 766 ntTSL 512.69□□□□□ -0.383e-6■■□□□ 13.1
LSM11P83369 EXOC7-211ENST00000465252 3336 ntTSL 212.81□□□□□ -0.364e-6■■□□□ 13.1
LSM11P83369 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.624e-6■■□□□ 13.1
LSM11P83369 EXOC7-201ENST00000332065 4596 ntAPPRIS P3 TSL 2 BASIC10.27□□□□□ -0.764e-6■■□□□ 13.1
LSM11P83369 ASPSCR1-220ENST00000585140 447 ntTSL 316.17■□□□□ 0.181e-8■■□□□ 13.1
LSM11P83369 ASPSCR1-214ENST00000582404 534 ntTSL 315.25■□□□□ 0.031e-8■■□□□ 13.1
LSM11P83369 FASN-213ENST00000637693 100 ntTSL 58.67□□□□□ -1.023e-7■■□□□ 13.1
LSM11P83369 AC069061.4-201ENST00000581294 1347 ntBASIC10.56□□□□□ -0.723e-20■■□□□ 13.1
LSM11P83369 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.992e-6■■□□□ 13.1
LSM11P83369 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.312e-6■■□□□ 13.1
LSM11P83369 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.022e-6■■□□□ 13.1
LSM11P83369 PELP1-214ENST00000575329 3280 ntTSL 214.72□□□□□ -0.052e-6■■□□□ 13.1
LSM11P83369 ARFIP2-209ENST00000531037 1560 ntTSL 314.33□□□□□ -0.122e-6■■□□□ 13.1
LSM11P83369 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.122e-6■■□□□ 13.1
LSM11P83369 HJURP-205ENST00000433484 823 ntTSL 513.85□□□□□ -0.192e-6■■□□□ 13.1
LSM11P83369 SRSF11-208ENST00000463859 1035 ntTSL 513.85□□□□□ -0.192e-6■■□□□ 13.1
LSM11P83369 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.212e-6■■□□□ 13.1
LSM11P83369 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.41□□□□□ -0.262e-6■■□□□ 13.1
Retrieved 100 of 11,495 protein–RNA pairs in 65.7 ms