Protein–RNA interactions for Protein: P54108

CRISP3, Cysteine-rich secretory protein 3, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRISP3P54108 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.7■□□□□ 0.58
CRISP3P54108 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CRISP3P54108 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CRISP3P54108 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CRISP3P54108 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.7■□□□□ 0.58
CRISP3P54108 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRISP3P54108 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CRISP3P54108 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CRISP3P54108 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CRISP3P54108 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.7■□□□□ 0.58
CRISP3P54108 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CRISP3P54108 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRISP3P54108 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.7■□□□□ 0.58
CRISP3P54108 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.7■□□□□ 0.58
CRISP3P54108 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRISP3P54108 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRISP3P54108 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRISP3P54108 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRISP3P54108 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRISP3P54108 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CRISP3P54108 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.69■□□□□ 0.58
CRISP3P54108 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.69■□□□□ 0.58
CRISP3P54108 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.69■□□□□ 0.58
CRISP3P54108 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRISP3P54108 AC100791.3-201ENST00000617619 330 ntBASIC18.69■□□□□ 0.58
CRISP3P54108 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CRISP3P54108 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRISP3P54108 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRISP3P54108 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.69■□□□□ 0.58
CRISP3P54108 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.69■□□□□ 0.58
CRISP3P54108 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRISP3P54108 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRISP3P54108 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.69■□□□□ 0.58
CRISP3P54108 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRISP3P54108 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRISP3P54108 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRISP3P54108 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.69■□□□□ 0.58
CRISP3P54108 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.69■□□□□ 0.58
CRISP3P54108 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRISP3P54108 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRISP3P54108 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CRISP3P54108 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CRISP3P54108 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.68■□□□□ 0.58
CRISP3P54108 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRISP3P54108 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.68■□□□□ 0.58
CRISP3P54108 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.68■□□□□ 0.58
CRISP3P54108 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRISP3P54108 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRISP3P54108 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRISP3P54108 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRISP3P54108 MCRIP2P1-201ENST00000394346 511 ntBASIC18.68■□□□□ 0.58
CRISP3P54108 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.68■□□□□ 0.58
CRISP3P54108 RARRES2P4-201ENST00000514074 484 ntBASIC18.68■□□□□ 0.58
CRISP3P54108 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.68■□□□□ 0.58
CRISP3P54108 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRISP3P54108 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CRISP3P54108 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.68■□□□□ 0.58
CRISP3P54108 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRISP3P54108 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.68■□□□□ 0.58
CRISP3P54108 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRISP3P54108 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.68■□□□□ 0.58
CRISP3P54108 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CRISP3P54108 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRISP3P54108 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRISP3P54108 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRISP3P54108 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CRISP3P54108 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRISP3P54108 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRISP3P54108 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRISP3P54108 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CRISP3P54108 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRISP3P54108 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CRISP3P54108 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRISP3P54108 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CRISP3P54108 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRISP3P54108 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRISP3P54108 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.67■□□□□ 0.58
CRISP3P54108 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.67■□□□□ 0.58
CRISP3P54108 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CRISP3P54108 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.67■□□□□ 0.58
CRISP3P54108 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.67■□□□□ 0.58
CRISP3P54108 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRISP3P54108 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.67■□□□□ 0.58
CRISP3P54108 AL691432.2-201ENST00000607222 2038 ntBASIC18.67■□□□□ 0.58
CRISP3P54108 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRISP3P54108 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRISP3P54108 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CRISP3P54108 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CRISP3P54108 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.67■□□□□ 0.58
CRISP3P54108 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CRISP3P54108 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRISP3P54108 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRISP3P54108 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.66■□□□□ 0.58
CRISP3P54108 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRISP3P54108 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CRISP3P54108 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CRISP3P54108 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRISP3P54108 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CRISP3P54108 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRISP3P54108 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms