Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
CDR1P51861 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDR1P51861 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CDR1P51861 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDR1P51861 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CDR1P51861 AL049796.1-201ENST00000565336 1766 ntBASIC21.76■■□□□ 1.07
CDR1P51861 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDR1P51861 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDR1P51861 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.76■■□□□ 1.07
CDR1P51861 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDR1P51861 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDR1P51861 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDR1P51861 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CDR1P51861 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.76■■□□□ 1.07
CDR1P51861 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.76■■□□□ 1.07
CDR1P51861 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDR1P51861 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDR1P51861 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.76■■□□□ 1.07
CDR1P51861 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CDR1P51861 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.76■■□□□ 1.07
CDR1P51861 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDR1P51861 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDR1P51861 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.76■■□□□ 1.07
CDR1P51861 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CDR1P51861 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDR1P51861 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDR1P51861 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
CDR1P51861 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CDR1P51861 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDR1P51861 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDR1P51861 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.75■■□□□ 1.07
CDR1P51861 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDR1P51861 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDR1P51861 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDR1P51861 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.75■■□□□ 1.07
CDR1P51861 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.75■■□□□ 1.07
CDR1P51861 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDR1P51861 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDR1P51861 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.75■■□□□ 1.07
CDR1P51861 POU5F1P3-201ENST00000428824 1078 ntBASIC21.75■■□□□ 1.07
CDR1P51861 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.75■■□□□ 1.07
CDR1P51861 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.75■■□□□ 1.07
CDR1P51861 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.75■■□□□ 1.07
CDR1P51861 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDR1P51861 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.75■■□□□ 1.07
CDR1P51861 PLK5-205ENST00000642079 1969 ntBASIC21.75■■□□□ 1.07
CDR1P51861 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.75■■□□□ 1.07
CDR1P51861 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
CDR1P51861 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDR1P51861 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.74■■□□□ 1.07
CDR1P51861 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.74■■□□□ 1.07
CDR1P51861 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDR1P51861 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDR1P51861 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDR1P51861 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDR1P51861 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDR1P51861 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDR1P51861 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDR1P51861 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.74■■□□□ 1.07
CDR1P51861 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.74■■□□□ 1.07
CDR1P51861 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.74■■□□□ 1.07
CDR1P51861 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CDR1P51861 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.74■■□□□ 1.07
CDR1P51861 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
CDR1P51861 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.74■■□□□ 1.07
CDR1P51861 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.74■■□□□ 1.07
CDR1P51861 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDR1P51861 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.74■■□□□ 1.07
CDR1P51861 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDR1P51861 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CDR1P51861 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDR1P51861 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDR1P51861 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDR1P51861 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDR1P51861 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.73■■□□□ 1.07
CDR1P51861 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDR1P51861 ESRRAP1-201ENST00000400596 1257 ntBASIC21.73■■□□□ 1.07
CDR1P51861 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDR1P51861 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.73■■□□□ 1.07
CDR1P51861 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.73■■□□□ 1.07
CDR1P51861 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CDR1P51861 AC008687.6-201ENST00000596318 630 ntBASIC21.73■■□□□ 1.07
CDR1P51861 AL589743.5-201ENST00000616611 1050 ntBASIC21.73■■□□□ 1.07
CDR1P51861 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.73■■□□□ 1.07
CDR1P51861 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CDR1P51861 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDR1P51861 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDR1P51861 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.73■■□□□ 1.07
CDR1P51861 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CDR1P51861 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
CDR1P51861 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CDR1P51861 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDR1P51861 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDR1P51861 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDR1P51861 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDR1P51861 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDR1P51861 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDR1P51861 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.72■■□□□ 1.07
CDR1P51861 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.72■■□□□ 1.07
CDR1P51861 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms