Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC12.65□□□□□ -0.38
UBE2AP49459 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC12.65□□□□□ -0.38
UBE2AP49459 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 AC016769.1-201ENST00000409132 1010 ntBASIC12.65□□□□□ -0.38
UBE2AP49459 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC12.65□□□□□ -0.38
UBE2AP49459 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC12.65□□□□□ -0.38
UBE2AP49459 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC12.65□□□□□ -0.38
UBE2AP49459 UBE2DNL-204ENST00000602536 740 ntBASIC12.65□□□□□ -0.38
UBE2AP49459 FAM21FP-204ENST00000608637 956 ntBASIC12.65□□□□□ -0.38
UBE2AP49459 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
UBE2AP49459 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
UBE2AP49459 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC12.65□□□□□ -0.38
UBE2AP49459 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.65□□□□□ -0.38
UBE2AP49459 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
UBE2AP49459 BID-203ENST00000399765 1879 ntTSL 2 BASIC12.65□□□□□ -0.38
UBE2AP49459 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC12.65□□□□□ -0.38
UBE2AP49459 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.65□□□□□ -0.38
UBE2AP49459 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
UBE2AP49459 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
UBE2AP49459 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
UBE2AP49459 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC12.65□□□□□ -0.39
UBE2AP49459 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
UBE2AP49459 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC12.64□□□□□ -0.39
UBE2AP49459 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
UBE2AP49459 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC12.64□□□□□ -0.39
UBE2AP49459 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
UBE2AP49459 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
UBE2AP49459 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 AC073314.1-201ENST00000568729 2216 ntBASIC12.64□□□□□ -0.39
UBE2AP49459 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 AP005212.1-201ENST00000581547 1997 ntBASIC12.64□□□□□ -0.39
UBE2AP49459 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC12.64□□□□□ -0.39
UBE2AP49459 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC12.64□□□□□ -0.39
UBE2AP49459 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
UBE2AP49459 BMP1-204ENST00000397814 836 ntTSL 4 BASIC12.64□□□□□ -0.39
UBE2AP49459 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC12.64□□□□□ -0.39
UBE2AP49459 KRT18P11-201ENST00000435214 1283 ntBASIC12.64□□□□□ -0.39
UBE2AP49459 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC12.64□□□□□ -0.39
UBE2AP49459 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC12.64□□□□□ -0.39
UBE2AP49459 SLC7A5P1-201ENST00000568957 537 ntBASIC12.64□□□□□ -0.39
UBE2AP49459 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC12.64□□□□□ -0.39
UBE2AP49459 AC243732.1-201ENST00000612648 864 ntBASIC12.64□□□□□ -0.39
UBE2AP49459 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC12.64□□□□□ -0.39
UBE2AP49459 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
UBE2AP49459 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC12.64□□□□□ -0.39
UBE2AP49459 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
UBE2AP49459 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 AC020907.5-201ENST00000624372 1936 ntBASIC12.64□□□□□ -0.39
UBE2AP49459 PKD1P5-201ENST00000532415 10291 ntBASIC12.64□□□□□ -0.39
UBE2AP49459 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC12.64□□□□□ -0.39
UBE2AP49459 AC027702.1-201ENST00000563810 1770 ntBASIC12.64□□□□□ -0.39
UBE2AP49459 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2AP49459 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
UBE2AP49459 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC12.63□□□□□ -0.39
UBE2AP49459 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
UBE2AP49459 RBM17P2-201ENST00000616397 1405 ntBASIC12.63□□□□□ -0.39
UBE2AP49459 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
UBE2AP49459 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
UBE2AP49459 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
UBE2AP49459 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC12.63□□□□□ -0.39
UBE2AP49459 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2AP49459 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms