Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.1□□□□□ -1.436e-16■■■■□ 23.3
RPS3P23396 GPR162-207ENST00000545321 683 ntTSL 225.23■■□□□ 1.631e-9■■■■□ 23.3
RPS3P23396 AZGP1-205ENST00000483612 679 ntTSL 315.37■□□□□ 0.051e-8■■■■□ 23.3
RPS3P23396 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.21e-7■■■■□ 23.3
RPS3P23396 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC11.87□□□□□ -0.511e-7■■■■□ 23.3
RPS3P23396 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.349e-7■■■■□ 23.3
RPS3P23396 SREBF1-216ENST00000490796 698 ntTSL 218.9■□□□□ 0.623e-7■■■■□ 23.3
RPS3P23396 SREBF1-207ENST00000447641 644 ntTSL 313.83□□□□□ -0.23e-7■■■■□ 23.3
RPS3P23396 CPD-206ENST00000583275 415 ntTSL 27.03□□□□□ -1.288e-30■■■■□ 23.3
RPS3P23396 TUBA1C-208ENST00000552125 575 ntTSL 410.42□□□□□ -0.743e-9■■■■□ 23.3
RPS3P23396 TUBA1C-204ENST00000549183 696 ntTSL 2 BASIC8.71□□□□□ -1.023e-9■■■■□ 23.3
RPS3P23396 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.131e-6■■■■□ 23.3
RPS3P23396 PPIH-203ENST00000372550 665 ntTSL 1 (best) BASIC7.67□□□□□ -1.181e-6■■■■□ 23.3
RPS3P23396 MYL4-207ENST00000572303 544 ntTSL 310.74□□□□□ -0.691e-8■■■■□ 23.3
RPS3P23396 SF3B3-212ENST00000568539 555 ntTSL 28.34□□□□□ -1.071e-8■■■■□ 23.3
RPS3P23396 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.286e-9■■■■□ 23.3
RPS3P23396 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.136e-9■■■■□ 23.3
RPS3P23396 CCDC86-202ENST00000535217 1488 ntTSL 517.04■□□□□ 0.322e-8■■■■□ 23.3
RPS3P23396 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.083e-6■■■■□ 23.3
RPS3P23396 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.192e-8■■■■□ 23.3
RPS3P23396 ATP1B3-206ENST00000482635 569 ntTSL 54.83□□□□□ -1.642e-6■■■■□ 23.3
RPS3P23396 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.2□□□□□ -1.16e-7■■■■□ 23.2
RPS3P23396 EPHX1-203ENST00000445856 567 ntTSL 219.66■□□□□ 0.745e-8■■■■□ 23.2
RPS3P23396 EPHX1-204ENST00000448202 895 ntTSL 217.23■□□□□ 0.355e-8■■■■□ 23.2
RPS3P23396 DPP4-208ENST00000491591 969 ntTSL 312.08□□□□□ -0.481e-8■■■■□ 23.2
RPS3P23396 RPL15-212ENST00000490223 1785 ntTSL 220.14■□□□□ 0.814e-15■■■■□ 23.2
RPS3P23396 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.044e-15■■■■□ 23.2
RPS3P23396 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.264e-15■■■■□ 23.2
RPS3P23396 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.284e-15■■■■□ 23.2
RPS3P23396 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.44e-15■■■■□ 23.2
RPS3P23396 CD59-205ENST00000437761 758 ntAPPRIS P2 TSL 4 BASIC11.55□□□□□ -0.561e-10■■■■□ 23.2
RPS3P23396 RPL15-210ENST00000456530 2835 ntTSL 1 (best) BASIC11.24□□□□□ -0.614e-15■■■■□ 23.2
RPS3P23396 RPL15-204ENST00000413699 2053 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.674e-15■■■■□ 23.2
RPS3P23396 RPL15-211ENST00000465786 1729 ntTSL 1 (best)10.28□□□□□ -0.764e-15■■■■□ 23.2
RPS3P23396 CD59-214ENST00000534312 572 ntAPPRIS ALT2 TSL 3 BASIC10.09□□□□□ -0.791e-10■■■■□ 23.2
RPS3P23396 CD59-207ENST00000525763 789 ntTSL 310.02□□□□□ -0.811e-10■■■■□ 23.2
RPS3P23396 RPL15-203ENST00000412097 562 ntTSL 59.91□□□□□ -0.824e-15■■■■□ 23.2
RPS3P23396 RPL15-207ENST00000434031 650 ntTSL 59.59□□□□□ -0.874e-15■■■■□ 23.2
RPS3P23396 CD59-203ENST00000415002 1878 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.981e-10■■■■□ 23.2
RPS3P23396 CD59-209ENST00000527926 633 ntTSL 38.7□□□□□ -1.021e-10■■■■□ 23.2
RPS3P23396 CD59-204ENST00000426650 741 ntAPPRIS P2 TSL 3 BASIC8.68□□□□□ -1.021e-10■■■■□ 23.2
RPS3P23396 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC7.7□□□□□ -1.181e-10■■■■□ 23.2
RPS3P23396 EIF2S1-201ENST00000256383 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.743e-7■■■■□ 23.2
RPS3P23396 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.632e-6■■■■□ 23.2
RPS3P23396 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.942e-6■■■■□ 23.2
RPS3P23396 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.372e-6■■■■□ 23.2
RPS3P23396 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC8.45□□□□□ -1.062e-6■■■■□ 23.2
RPS3P23396 SCAMP2-211ENST00000569251 867 ntTSL 212.39□□□□□ -0.433e-8■■■■□ 23.2
RPS3P23396 TF-205ENST00000462495 582 ntTSL 28.21□□□□□ -1.12e-44■■■■□ 23.2
RPS3P23396 AC012313.3-203ENST00000596636 436 ntTSL 513.94□□□□□ -0.185e-11■■■■□ 23.2
RPS3P23396 NME1-201ENST00000013034 796 ntTSL 3 BASIC10.54□□□□□ -0.725e-9■■■■□ 23.2
RPS3P23396 TRIM28-211ENST00000597968 504 ntTSL 213.09□□□□□ -0.319e-11■■■■□ 23.2
RPS3P23396 ALDOA-214ENST00000564688 613 ntTSL 511.27□□□□□ -0.614e-79■■■■□ 23.2
RPS3P23396 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.319e-22■■■■□ 23.2
RPS3P23396 PCNA-201ENST00000379143 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.539e-22■■■■□ 23.2
RPS3P23396 ZWINT-209ENST00000494312 1961 ntTSL 213.54□□□□□ -0.241e-6■■■■□ 23.2
RPS3P23396 ZWINT-208ENST00000489649 1621 ntTSL 513.43□□□□□ -0.261e-6■■■■□ 23.2
RPS3P23396 ZWINT-203ENST00000373944 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.381e-6■■■■□ 23.2
RPS3P23396 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.431e-6■■■■□ 23.2
RPS3P23396 ZWINT-204ENST00000395405 1851 ntAPPRIS P3 TSL 2 BASIC10.63□□□□□ -0.711e-6■■■■□ 23.2
RPS3P23396 PDHB-208ENST00000480626 710 ntTSL 317.06■□□□□ 0.323e-8■■■■□ 23.2
RPS3P23396 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.682e-10■■■■□ 23.2
RPS3P23396 ANG-203ENST00000554073 251 ntTSL 32.08□□□□□ -2.082e-10■■■■□ 23.2
RPS3P23396 SERPINF1-211ENST00000576406 795 ntTSL 312.24□□□□□ -0.453e-22■■■■□ 23.2
RPS3P23396 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.995e-8■■■■□ 23.2
RPS3P23396 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.755e-8■■■■□ 23.2
RPS3P23396 ANAPC11-209ENST00000573956 2136 nt18.4■□□□□ 0.545e-8■■■■□ 23.2
RPS3P23396 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.375e-8■■■■□ 23.2
RPS3P23396 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC11.16□□□□□ -0.625e-8■■■■□ 23.2
RPS3P23396 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.132e-9■■■■□ 23.2
RPS3P23396 CENPN-207ENST00000564669 730 ntTSL 320.22■□□□□ 0.833e-7■■■■□ 23.2
RPS3P23396 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.55■□□□□ 0.723e-7■■■■□ 23.2
RPS3P23396 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.223e-7■■■■□ 23.2
RPS3P23396 URM1-201ENST00000372847 753 ntTSL 3 BASIC10.25□□□□□ -0.772e-6■■■■□ 23.2
RPS3P23396 CENPN-209ENST00000569461 329 ntTSL 310.11□□□□□ -0.793e-7■■■■□ 23.2
RPS3P23396 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.48□□□□□ -1.213e-7■■■■□ 23.2
RPS3P23396 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.9□□□□□ -1.33e-7■■■■□ 23.2
RPS3P23396 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.39□□□□□ -1.393e-7■■■■□ 23.2
RPS3P23396 CENPN-208ENST00000568445 591 ntTSL 55.74□□□□□ -1.493e-7■■■■□ 23.2
RPS3P23396 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.091e-6■■■■□ 23.2
RPS3P23396 SKIV2L2-207ENST00000506750 3271 ntTSL 23.99□□□□□ -1.771e-6■■■■□ 23.2
RPS3P23396 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.124e-18■■■■□ 23.2
RPS3P23396 RPS19-204ENST00000598399 1172 ntTSL 512.51□□□□□ -0.413e-21■■■■□ 23.2
RPS3P23396 RPS19-203ENST00000598261 307 ntTSL 311.57□□□□□ -0.563e-21■■■■□ 23.2
RPS3P23396 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.01□□□□□ -0.014e-7■■■■□ 23.2
RPS3P23396 F2-202ENST00000442468 1031 ntTSL 320.3■□□□□ 0.847e-19■■■■□ 23.2
RPS3P23396 NCSTN-204ENST00000424645 958 ntTSL 510.05□□□□□ -0.81e-6■■■■□ 23.1
RPS3P23396 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.021e-6■■■■□ 23.1
RPS3P23396 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.021e-6■■■■□ 23.1
RPS3P23396 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.078e-8■■■■□ 23.1
RPS3P23396 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.25□□□□□ -0.138e-8■■■■□ 23.1
RPS3P23396 CYC1-204ENST00000533444 1832 ntTSL 1 (best)26.55■■□□□ 1.843e-7■■■■□ 23.1
RPS3P23396 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.943e-7■■■■□ 23.1
RPS3P23396 TOP2B-203ENST00000424225 3525 ntTSL 1 (best)12.3□□□□□ -0.444e-6■■■■□ 23.1
RPS3P23396 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.412e-9■■■■□ 23.1
RPS3P23396 CYBA-206ENST00000566229 405 ntTSL 313.9□□□□□ -0.182e-20■■■■□ 23.1
RPS3P23396 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.68■□□□□ 0.586e-7■■■■□ 23.1
RPS3P23396 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.71■□□□□ 0.266e-7■■■■□ 23.1
RPS3P23396 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.076e-7■■■■□ 23.1
RPS3P23396 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.076e-7■■■■□ 23.1
Retrieved 100 of 24,271 protein–RNA pairs in 190.3 ms