Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H2AFXP16104 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2AFXP16104 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
H2AFXP16104 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2AFXP16104 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2AFXP16104 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2AFXP16104 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2AFXP16104 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2AFXP16104 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
H2AFXP16104 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
H2AFXP16104 AC061975.6-201ENST00000579045 1553 ntBASIC20.78■□□□□ 0.92
H2AFXP16104 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
H2AFXP16104 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.78■□□□□ 0.92
H2AFXP16104 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.78■□□□□ 0.92
H2AFXP16104 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.78■□□□□ 0.92
H2AFXP16104 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.78■□□□□ 0.92
H2AFXP16104 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
H2AFXP16104 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2AFXP16104 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2AFXP16104 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2AFXP16104 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2AFXP16104 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.78■□□□□ 0.92
H2AFXP16104 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
H2AFXP16104 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.77■□□□□ 0.92
H2AFXP16104 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.77■□□□□ 0.92
H2AFXP16104 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2AFXP16104 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2AFXP16104 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2AFXP16104 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.77■□□□□ 0.92
H2AFXP16104 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2AFXP16104 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2AFXP16104 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2AFXP16104 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.77■□□□□ 0.92
H2AFXP16104 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2AFXP16104 AL033527.3-201ENST00000566366 1196 ntBASIC20.77■□□□□ 0.92
H2AFXP16104 AL031848.2-201ENST00000607670 837 ntBASIC20.77■□□□□ 0.92
H2AFXP16104 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2AFXP16104 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
H2AFXP16104 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.77■□□□□ 0.91
H2AFXP16104 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
H2AFXP16104 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.77■□□□□ 0.91
H2AFXP16104 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.77■□□□□ 0.91
H2AFXP16104 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
H2AFXP16104 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.76■□□□□ 0.91
H2AFXP16104 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.76■□□□□ 0.91
H2AFXP16104 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2AFXP16104 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.76■□□□□ 0.91
H2AFXP16104 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
H2AFXP16104 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
H2AFXP16104 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.76■□□□□ 0.91
H2AFXP16104 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2AFXP16104 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
H2AFXP16104 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2AFXP16104 AL161938.1-201ENST00000569833 2180 ntBASIC20.76■□□□□ 0.91
H2AFXP16104 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2AFXP16104 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2AFXP16104 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.76■□□□□ 0.91
H2AFXP16104 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
H2AFXP16104 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.75■□□□□ 0.91
H2AFXP16104 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H2AFXP16104 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2AFXP16104 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H2AFXP16104 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2AFXP16104 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H2AFXP16104 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2AFXP16104 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
H2AFXP16104 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.75■□□□□ 0.91
H2AFXP16104 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H2AFXP16104 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H2AFXP16104 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2AFXP16104 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.75■□□□□ 0.91
H2AFXP16104 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
H2AFXP16104 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2AFXP16104 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H2AFXP16104 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2AFXP16104 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.74■□□□□ 0.91
H2AFXP16104 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
H2AFXP16104 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2AFXP16104 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2AFXP16104 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H2AFXP16104 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.74■□□□□ 0.91
H2AFXP16104 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.74■□□□□ 0.91
H2AFXP16104 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.74■□□□□ 0.91
H2AFXP16104 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2AFXP16104 AC139713.2-201ENST00000641328 2723 ntBASIC20.74■□□□□ 0.91
H2AFXP16104 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H2AFXP16104 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2AFXP16104 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H2AFXP16104 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H2AFXP16104 AC010997.5-201ENST00000609182 354 ntBASIC20.74■□□□□ 0.91
H2AFXP16104 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.74■□□□□ 0.91
H2AFXP16104 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.74■□□□□ 0.91
H2AFXP16104 SYT6-210ENST00000641643 1587 ntBASIC20.74■□□□□ 0.91
H2AFXP16104 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.74■□□□□ 0.91
H2AFXP16104 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2AFXP16104 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2AFXP16104 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
H2AFXP16104 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.73■□□□□ 0.91
H2AFXP16104 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
H2AFXP16104 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms