Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
HLA-AP01891 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-AP01891 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-AP01891 AP004607.4-201ENST00000530158 1459 ntBASIC16.84■□□□□ 0.29
HLA-AP01891 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-AP01891 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
HLA-AP01891 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-AP01891 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-AP01891 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-AP01891 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-AP01891 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-AP01891 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-AP01891 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.83■□□□□ 0.29
HLA-AP01891 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-AP01891 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-AP01891 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-AP01891 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
HLA-AP01891 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-AP01891 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-AP01891 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-AP01891 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-AP01891 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-AP01891 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-AP01891 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-AP01891 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-AP01891 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-AP01891 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.83■□□□□ 0.28
HLA-AP01891 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-AP01891 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-AP01891 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-AP01891 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HLA-AP01891 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-AP01891 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-AP01891 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.82■□□□□ 0.28
HLA-AP01891 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-AP01891 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-AP01891 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-AP01891 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-AP01891 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-AP01891 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-AP01891 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-AP01891 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-AP01891 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.82■□□□□ 0.28
HLA-AP01891 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-AP01891 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-AP01891 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-AP01891 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-AP01891 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-AP01891 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-AP01891 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.81■□□□□ 0.28
HLA-AP01891 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 AC005082.1-201ENST00000413042 2259 ntBASIC16.81■□□□□ 0.28
HLA-AP01891 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HLA-AP01891 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HLA-AP01891 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-AP01891 BX842568.3-201ENST00000418104 571 ntBASIC16.81■□□□□ 0.28
HLA-AP01891 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-AP01891 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-AP01891 AC126544.1-201ENST00000580842 1059 ntBASIC16.81■□□□□ 0.28
HLA-AP01891 AC233992.3-201ENST00000607491 485 ntBASIC16.81■□□□□ 0.28
HLA-AP01891 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
HLA-AP01891 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-AP01891 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-AP01891 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HLA-AP01891 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-AP01891 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-AP01891 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HLA-AP01891 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-AP01891 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-AP01891 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-AP01891 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-AP01891 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-AP01891 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-AP01891 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-AP01891 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.8■□□□□ 0.28
HLA-AP01891 EDA-201ENST00000338901 1233 ntBASIC16.8■□□□□ 0.28
HLA-AP01891 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HLA-AP01891 AC099791.1-201ENST00000416440 715 ntBASIC16.8■□□□□ 0.28
HLA-AP01891 AP001330.3-201ENST00000520123 633 ntBASIC16.8■□□□□ 0.28
HLA-AP01891 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HLA-AP01891 AF213884.3-201ENST00000563833 479 ntBASIC16.8■□□□□ 0.28
HLA-AP01891 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-AP01891 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-AP01891 AL355001.2-201ENST00000620617 1191 ntBASIC16.8■□□□□ 0.28
HLA-AP01891 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms