Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNKO75909 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNKO75909 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCNKO75909 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNKO75909 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CCNKO75909 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNKO75909 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.32■□□□□ 0.36
CCNKO75909 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.32■□□□□ 0.36
CCNKO75909 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.32■□□□□ 0.36
CCNKO75909 AC092720.2-201ENST00000602388 1665 ntBASIC17.32■□□□□ 0.36
CCNKO75909 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.32■□□□□ 0.36
CCNKO75909 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.32■□□□□ 0.36
CCNKO75909 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNKO75909 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.32■□□□□ 0.36
CCNKO75909 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.32■□□□□ 0.36
CCNKO75909 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNKO75909 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCNKO75909 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CCNKO75909 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCNKO75909 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNKO75909 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCNKO75909 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.31■□□□□ 0.36
CCNKO75909 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNKO75909 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNKO75909 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CCNKO75909 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNKO75909 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCNKO75909 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNKO75909 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCNKO75909 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.31■□□□□ 0.36
CCNKO75909 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNKO75909 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCNKO75909 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CCNKO75909 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCNKO75909 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNKO75909 AC068880.1-201ENST00000507289 2297 ntBASIC17.31■□□□□ 0.36
CCNKO75909 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CCNKO75909 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.3■□□□□ 0.36
CCNKO75909 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.3■□□□□ 0.36
CCNKO75909 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCNKO75909 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCNKO75909 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CCNKO75909 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.3■□□□□ 0.36
CCNKO75909 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.3■□□□□ 0.36
CCNKO75909 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCNKO75909 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CCNKO75909 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 PRORSD1P-202ENST00000563365 2154 ntBASIC17.3■□□□□ 0.36
CCNKO75909 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNKO75909 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.29■□□□□ 0.36
CCNKO75909 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCNKO75909 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCNKO75909 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNKO75909 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNKO75909 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCNKO75909 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNKO75909 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCNKO75909 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNKO75909 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNKO75909 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.29■□□□□ 0.36
CCNKO75909 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCNKO75909 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCNKO75909 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNKO75909 TREX1-205ENST00000625293 1783 ntBASIC17.29■□□□□ 0.36
CCNKO75909 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNKO75909 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCNKO75909 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCNKO75909 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNKO75909 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNKO75909 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCNKO75909 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNKO75909 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNKO75909 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNKO75909 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNKO75909 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CCNKO75909 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNKO75909 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.28■□□□□ 0.36
CCNKO75909 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms