Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1BO75841 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1BO75841 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1BO75841 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
UPK1BO75841 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1BO75841 AC055733.4-201ENST00000638462 1354 ntBASIC17.43■□□□□ 0.38
UPK1BO75841 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1BO75841 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1BO75841 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1BO75841 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1BO75841 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
UPK1BO75841 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1BO75841 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1BO75841 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.43■□□□□ 0.38
UPK1BO75841 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.43■□□□□ 0.38
UPK1BO75841 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.43■□□□□ 0.38
UPK1BO75841 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.43■□□□□ 0.38
UPK1BO75841 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.43■□□□□ 0.38
UPK1BO75841 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1BO75841 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.43■□□□□ 0.38
UPK1BO75841 BX119927.1-201ENST00000636596 1552 ntBASIC17.43■□□□□ 0.38
UPK1BO75841 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1BO75841 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.43■□□□□ 0.38
UPK1BO75841 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1BO75841 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1BO75841 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1BO75841 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1BO75841 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1BO75841 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1BO75841 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1BO75841 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.42■□□□□ 0.38
UPK1BO75841 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1BO75841 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1BO75841 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
UPK1BO75841 PRORSD1P-202ENST00000563365 2154 ntBASIC17.42■□□□□ 0.38
UPK1BO75841 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UPK1BO75841 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UPK1BO75841 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.42■□□□□ 0.38
UPK1BO75841 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
UPK1BO75841 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1BO75841 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UPK1BO75841 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.42■□□□□ 0.38
UPK1BO75841 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1BO75841 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1BO75841 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.42■□□□□ 0.38
UPK1BO75841 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1BO75841 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
UPK1BO75841 AC012313.1-201ENST00000593393 3059 ntBASIC17.42■□□□□ 0.38
UPK1BO75841 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1BO75841 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
UPK1BO75841 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1BO75841 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1BO75841 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.42■□□□□ 0.38
UPK1BO75841 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.42■□□□□ 0.38
UPK1BO75841 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1BO75841 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPK1BO75841 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPK1BO75841 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
UPK1BO75841 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
UPK1BO75841 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPK1BO75841 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPK1BO75841 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.41■□□□□ 0.38
UPK1BO75841 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPK1BO75841 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.41■□□□□ 0.38
UPK1BO75841 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPK1BO75841 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPK1BO75841 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.41■□□□□ 0.38
UPK1BO75841 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
UPK1BO75841 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
UPK1BO75841 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPK1BO75841 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
UPK1BO75841 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPK1BO75841 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPK1BO75841 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPK1BO75841 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPK1BO75841 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UPK1BO75841 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPK1BO75841 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.4■□□□□ 0.38
UPK1BO75841 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPK1BO75841 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
UPK1BO75841 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPK1BO75841 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
UPK1BO75841 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPK1BO75841 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPK1BO75841 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.4■□□□□ 0.38
UPK1BO75841 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPK1BO75841 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.4■□□□□ 0.38
UPK1BO75841 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.4■□□□□ 0.38
UPK1BO75841 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
UPK1BO75841 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.4■□□□□ 0.38
UPK1BO75841 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.4■□□□□ 0.38
UPK1BO75841 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
UPK1BO75841 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
UPK1BO75841 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPK1BO75841 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.4■□□□□ 0.38
UPK1BO75841 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPK1BO75841 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPK1BO75841 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPK1BO75841 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
UPK1BO75841 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms