Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC4O75487 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GPC4O75487 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.98■□□□□ 0.79
GPC4O75487 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.98■□□□□ 0.79
GPC4O75487 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GPC4O75487 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GPC4O75487 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
GPC4O75487 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.98■□□□□ 0.79
GPC4O75487 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GPC4O75487 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GPC4O75487 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
GPC4O75487 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GPC4O75487 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
GPC4O75487 AC083906.2-201ENST00000511578 360 ntBASIC19.98■□□□□ 0.79
GPC4O75487 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.98■□□□□ 0.79
GPC4O75487 AL356652.1-201ENST00000615962 565 ntBASIC19.98■□□□□ 0.79
GPC4O75487 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GPC4O75487 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GPC4O75487 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GPC4O75487 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GPC4O75487 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.98■□□□□ 0.79
GPC4O75487 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
GPC4O75487 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GPC4O75487 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
GPC4O75487 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GPC4O75487 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GPC4O75487 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.97■□□□□ 0.79
GPC4O75487 AL512408.1-201ENST00000569378 2000 ntBASIC19.97■□□□□ 0.79
GPC4O75487 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GPC4O75487 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.97■□□□□ 0.79
GPC4O75487 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
GPC4O75487 KRT18P68-201ENST00000392293 1000 ntBASIC19.97■□□□□ 0.79
GPC4O75487 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GPC4O75487 AL355472.2-201ENST00000422958 438 ntBASIC19.97■□□□□ 0.79
GPC4O75487 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
GPC4O75487 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.97■□□□□ 0.79
GPC4O75487 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.97■□□□□ 0.79
GPC4O75487 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.97■□□□□ 0.79
GPC4O75487 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.97■□□□□ 0.79
GPC4O75487 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
GPC4O75487 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
GPC4O75487 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.97■□□□□ 0.79
GPC4O75487 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.97■□□□□ 0.79
GPC4O75487 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GPC4O75487 HCG11-201ENST00000411553 5696 ntBASIC19.97■□□□□ 0.79
GPC4O75487 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.97■□□□□ 0.79
GPC4O75487 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GPC4O75487 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
GPC4O75487 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
GPC4O75487 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.97■□□□□ 0.79
GPC4O75487 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GPC4O75487 AC112907.3-201ENST00000577781 2400 ntBASIC19.96■□□□□ 0.79
GPC4O75487 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GPC4O75487 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
GPC4O75487 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.96■□□□□ 0.79
GPC4O75487 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
GPC4O75487 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GPC4O75487 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
GPC4O75487 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GPC4O75487 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GPC4O75487 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GPC4O75487 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.96■□□□□ 0.79
GPC4O75487 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.96■□□□□ 0.79
GPC4O75487 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
GPC4O75487 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.96■□□□□ 0.79
GPC4O75487 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.96■□□□□ 0.79
GPC4O75487 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
GPC4O75487 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.96■□□□□ 0.79
GPC4O75487 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GPC4O75487 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GPC4O75487 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.96■□□□□ 0.79
GPC4O75487 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
GPC4O75487 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
GPC4O75487 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.96■□□□□ 0.79
GPC4O75487 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GPC4O75487 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.96■□□□□ 0.79
GPC4O75487 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
GPC4O75487 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GPC4O75487 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
GPC4O75487 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GPC4O75487 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.79
GPC4O75487 AL162377.1-201ENST00000618844 1793 ntBASIC19.95■□□□□ 0.78
GPC4O75487 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GPC4O75487 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GPC4O75487 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GPC4O75487 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.95■□□□□ 0.78
GPC4O75487 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GPC4O75487 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
GPC4O75487 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.95■□□□□ 0.78
GPC4O75487 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
GPC4O75487 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.95■□□□□ 0.78
GPC4O75487 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GPC4O75487 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GPC4O75487 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.95■□□□□ 0.78
GPC4O75487 GUSBP6-202ENST00000438529 1198 ntBASIC19.95■□□□□ 0.78
GPC4O75487 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.95■□□□□ 0.78
GPC4O75487 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GPC4O75487 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
GPC4O75487 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.95■□□□□ 0.78
GPC4O75487 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms