Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	MYO2	YOR326W	4725 nt		1.97	□□□□□ -2.09
TY4B-P	A0A0B7P3V8	RPS26A	YGL189C	360 nt		1.97	□□□□□ -2.09
TY4B-P	A0A0B7P3V8	YGR240C-A	YGR240C-A	201 nt		1.97	□□□□□ -2.09
TY4B-P	A0A0B7P3V8	EMC5	YIL027C	426 nt		1.97	□□□□□ -2.09
TY4B-P	A0A0B7P3V8	YOR093C	YOR093C	4947 nt		1.97	□□□□□ -2.09
TY4B-P	A0A0B7P3V8	KIP1	YBL063W	3336 nt		1.96	□□□□□ -2.1
TY4B-P	A0A0B7P3V8	YOL164W-A	YOL164W-A	183 nt		1.96	□□□□□ -2.1
TY4B-P	A0A0B7P3V8	YLR419W	YLR419W	4308 nt		1.96	□□□□□ -2.1
TY4B-P	A0A0B7P3V8	snR14	snR14	160 nt		1.94	□□□□□ -2.1
TY4B-P	A0A0B7P3V8	NOP9	YJL010C	2001 nt		1.94	□□□□□ -2.1
TY4B-P	A0A0B7P3V8	FAB1	YFR019W	6837 nt		1.94	□□□□□ -2.1
TY4B-P	A0A0B7P3V8	snR190	snR190	190 nt		1.93	□□□□□ -2.1
TY4B-P	A0A0B7P3V8	DNF3	YMR162C	4971 nt		1.92	□□□□□ -2.1
TY4B-P	A0A0B7P3V8	SMC4	YLR086W	4257 nt		1.92	□□□□□ -2.1
TY4B-P	A0A0B7P3V8	PEP1	YBL017C	4740 nt		1.91	□□□□□ -2.1
TY4B-P	A0A0B7P3V8	RPL26B	YGR034W	384 nt		1.91	□□□□□ -2.1
TY4B-P	A0A0B7P3V8	IRC20	YLR247C	4671 nt		1.91	□□□□□ -2.1
TY4B-P	A0A0B7P3V8	snR53	snR53	91 nt		1.9	□□□□□ -2.11
TY4B-P	A0A0B7P3V8	KCS1	YDR017C	3153 nt		1.89	□□□□□ -2.11
TY4B-P	A0A0B7P3V8	FIG2	YCR089W	4830 nt		1.88	□□□□□ -2.11
TY4B-P	A0A0B7P3V8	snR47	snR47	99 nt		1.87	□□□□□ -2.11
TY4B-P	A0A0B7P3V8	CHS1	YNL192W	3396 nt		1.86	□□□□□ -2.11
TY4B-P	A0A0B7P3V8	GEA2	YEL022W	4380 nt		1.86	□□□□□ -2.11
TY4B-P	A0A0B7P3V8	STO1	YMR125W	2586 nt		1.86	□□□□□ -2.11
TY4B-P	A0A0B7P3V8	WAR1	YML076C	2835 nt		1.85	□□□□□ -2.11
TY4B-P	A0A0B7P3V8	RAD9	YDR217C	3930 nt		1.85	□□□□□ -2.11
TY4B-P	A0A0B7P3V8	SEC10	YLR166C	2616 nt		1.85	□□□□□ -2.11
TY4B-P	A0A0B7P3V8	YDR371C-A	YDR371C-A	105 nt		1.84	□□□□□ -2.11
TY4B-P	A0A0B7P3V8	SKI3	YPR189W	4299 nt		1.83	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	GLG1	YKR058W	1851 nt		1.83	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	ASE1	YOR058C	2658 nt		1.83	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	KAP122	YGL016W	3246 nt		1.82	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	VPS15	YBR097W	4365 nt		1.82	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	YLR286W-A	YLR286W-A	135 nt		1.82	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	RPM2	YML091C	3609 nt		1.82	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	AZF1	YOR113W	2745 nt		1.82	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	PIK1	YNL267W	3201 nt		1.81	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	ORC3	YLL004W	1851 nt		1.81	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	YBR200W-A	YBR200W-A	165 nt		1.8	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	BEM3	YPL115C	3387 nt		1.8	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	YLR422W	YLR422W	5799 nt		1.8	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	UBP3	YER151C	2739 nt		1.79	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	snR64	snR64	101 nt		1.79	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	NNF2	YGR089W	2811 nt		1.79	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	YDL073W	YDL073W	2955 nt		1.79	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	SPC110	YDR356W	2835 nt		1.78	□□□□□ -2.12
TY4B-P	A0A0B7P3V8	SXM1	YDR395W	2835 nt		1.76	□□□□□ -2.13
TY4B-P	A0A0B7P3V8	BST1	YFL025C	3090 nt		1.76	□□□□□ -2.13
TY4B-P	A0A0B7P3V8	PRP16	YKR086W	3216 nt		1.75	□□□□□ -2.13
TY4B-P	A0A0B7P3V8	ROM2	YLR371W	4071 nt		1.75	□□□□□ -2.13
TY4B-P	A0A0B7P3V8	MON2	YNL297C	4911 nt		1.74	□□□□□ -2.13
TY4B-P	A0A0B7P3V8	APL3	YBL037W	3078 nt		1.74	□□□□□ -2.13
TY4B-P	A0A0B7P3V8	YMR272W-B	YMR272W-B	108 nt		1.73	□□□□□ -2.13
TY4B-P	A0A0B7P3V8	snR50	snR50	90 nt		1.72	□□□□□ -2.13
TY4B-P	A0A0B7P3V8	YPR160W-A	YPR160W-A	81 nt		1.71	□□□□□ -2.14
TY4B-P	A0A0B7P3V8	SEC8	YPR055W	3198 nt		1.7	□□□□□ -2.14
TY4B-P	A0A0B7P3V8	tN(GUU)Q	tN(GUU)Q	71 nt		1.7	□□□□□ -2.14
TY4B-P	A0A0B7P3V8	YCS4	YLR272C	3531 nt		1.69	□□□□□ -2.14
TY4B-P	A0A0B7P3V8	tD(GUC)Q	tD(GUC)Q	75 nt		1.68	□□□□□ -2.14
TY4B-P	A0A0B7P3V8	SWI4	YER111C	3282 nt		1.67	□□□□□ -2.14
TY4B-P	A0A0B7P3V8	PMD1	YER132C	5262 nt		1.67	□□□□□ -2.14
TY4B-P	A0A0B7P3V8	ANS1	YHR126C	480 nt		1.67	□□□□□ -2.14
TY4B-P	A0A0B7P3V8	YLR399W-A	YLR399W-A	105 nt		1.67	□□□□□ -2.14
TY4B-P	A0A0B7P3V8	SEC3	YER008C	4011 nt		1.67	□□□□□ -2.14
TY4B-P	A0A0B7P3V8	YLR299C-A	YLR299C-A	93 nt		1.66	□□□□□ -2.14
TY4B-P	A0A0B7P3V8	FYV8	YGR196C	2454 nt		1.65	□□□□□ -2.14
TY4B-P	A0A0B7P3V8	MSN5	YDR335W	3675 nt		1.65	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	IRA1	YBR140C	9279 nt		1.64	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	PET127	YOR017W	2403 nt		1.64	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	YSP1	YHR155W	3687 nt		1.64	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	HKR1	YDR420W	5409 nt		1.63	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	EST2	YLR318W	2655 nt		1.63	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	CFT1	YDR301W	4074 nt		1.62	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	YKL225W	YKL225W	348 nt		1.62	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	NUP145	YGL092W	3954 nt		1.62	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	SSK2	YNR031C	4740 nt		1.62	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	MEC1	YBR136W	7107 nt		1.62	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	BRR2	YER172C	6492 nt		1.61	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	CDC25	YLR310C	4770 nt		1.61	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	EST1	YLR233C	2100 nt		1.6	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	snR69	snR69	101 nt		1.6	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	YBR109W-A	YBR109W-A	225 nt		1.6	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	NUP192	YJL039C	5052 nt		1.6	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	TRM732	YMR259C	4263 nt		1.6	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	NUP188	YML103C	4968 nt		1.59	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	YDL159C-B	YDL159C-B	177 nt		1.59	□□□□□ -2.15
TY4B-P	A0A0B7P3V8	ULP2	YIL031W	3105 nt		1.58	□□□□□ -2.16
TY4B-P	A0A0B7P3V8	CSE1	YGL238W	2883 nt		1.57	□□□□□ -2.16
TY4B-P	A0A0B7P3V8	CLU1	YMR012W	3834 nt		1.55	□□□□□ -2.16
TY4B-P	A0A0B7P3V8	CDC39	YCR093W	6327 nt		1.54	□□□□□ -2.16
TY4B-P	A0A0B7P3V8	RDS3	YPR094W	324 nt		1.54	□□□□□ -2.16
TY4B-P	A0A0B7P3V8	MSH3	YCR092C	3057 nt		1.54	□□□□□ -2.16
TY4B-P	A0A0B7P3V8	CCH1	YGR217W	6120 nt		1.53	□□□□□ -2.16
TY4B-P	A0A0B7P3V8	YML054C-A	YML054C-A	159 nt		1.53	□□□□□ -2.16
TY4B-P	A0A0B7P3V8	tQ(UUG)E2	tQ(UUG)E2	72 nt		1.52	□□□□□ -2.17
TY4B-P	A0A0B7P3V8	HUG1	YML058W-A	207 nt		1.51	□□□□□ -2.17
TY4B-P	A0A0B7P3V8	YHR180C-B	YHR180C-B	105 nt		1.5	□□□□□ -2.17
TY4B-P	A0A0B7P3V8	RPL41A	YDL184C	78 nt		1.49	□□□□□ -2.17
TY4B-P	A0A0B7P3V8	YBR296C-A	YBR296C-A	120 nt		1.45	□□□□□ -2.18
TY4B-P	A0A0B7P3V8	YNL284C-B	YNL284C-B	5268 nt		1.45	□□□□□ -2.18

Retrieved 100 of 7,029 protein–RNA pairs in 21.3 ms