Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 NCOA4P3-201ENST00000513203 1877 ntBASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
ZNF549Q6P9A3 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 FAM204BP-201ENST00000369171 701 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 MIR199B-201ENST00000384849 110 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 RN7SKP236-201ENST00000410635 284 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 RN7SKP85-201ENST00000411349 318 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 SNX18P13-201ENST00000412442 529 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 AL773545.3-201ENST00000414297 706 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 DBIL5P2-201ENST00000443827 253 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 PRDX1P1-201ENST00000449329 596 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 AL390728.3-201ENST00000452704 270 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 SNORA81.1-201ENST00000458922 177 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 AC016489.1-201ENST00000461109 375 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 RN7SL306P-201ENST00000492941 296 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 AC008417.1-201ENST00000510014 565 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 OR5M4P-201ENST00000529436 925 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 AF186192.2-204ENST00000581667 524 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 AL049869.1-201ENST00000556933 1402 ntBASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.06□□□□□ -1.28
ZNF549Q6P9A3 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AL353622.1-201ENST00000604716 1945 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 TPTE2P2-201ENST00000403471 1466 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AL590762.1-201ENST00000391782 432 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 VN1R66P-201ENST00000412929 916 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AL121916.1-201ENST00000429405 308 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AL354983.1-201ENST00000434580 906 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 PHBP4-201ENST00000437447 837 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 SEPT14P1-201ENST00000458703 648 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AC131233.1-201ENST00000479200 955 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 RPL23AP8-201ENST00000479812 475 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 ATP5J2P4-201ENST00000538774 267 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AL049869.4-201ENST00000555669 178 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 MIR5705-201ENST00000579870 89 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 STARD6-204ENST00000584040 660 ntTSL 3 BASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AL589765.5-201ENST00000596133 515 ntBASIC7.05□□□□□ -1.28
ZNF549Q6P9A3 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms