RNA–Protein interactions for RNA: ENST00000411349.1

RN7SKP85-201, Transcript of RNA, 7SK small nuclear pseudogene 85, humanhuman

BASIC

Gene RN7SKP85, Length 318 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP85-201ENST00000411349 CHIC1Q5VXU3 224 aa18.96■□□□□ 0.63
RN7SKP85-201ENST00000411349 AEBP2Q6ZN18 517 aaPredicted RBP18.66■□□□□ 0.58
RN7SKP85-201ENST00000411349 NISCHQ9Y2I1 1504 aa17.17■□□□□ 0.34
RN7SKP85-201ENST00000411349 PHF23Q9BUL5 403 aaPredicted RBP16.64■□□□□ 0.25
RN7SKP85-201ENST00000411349 SENP3Q9H4L4 574 aaPredicted RBP15.93■□□□□ 0.14
RN7SKP85-201ENST00000411349 PLPPR3Q6T4P5 718 aa15.75■□□□□ 0.11
RN7SKP85-201ENST00000411349 CCDC180Q9P1Z9 1646 aa15.2■□□□□ 0.02
RN7SKP85-201ENST00000411349 FOXD1Q16676 465 aa14.59□□□□□ -0.07
RN7SKP85-201ENST00000411349 ABCC9O60706 1549 aa14.59□□□□□ -0.07
RN7SKP85-201ENST00000411349 ADRA2BP18089 450 aa14.54□□□□□ -0.08
RN7SKP85-201ENST00000411349 PPP6R1Q9UPN7 881 aa14.47□□□□□ -0.09
RN7SKP85-201ENST00000411349 ZCCHC6Q5VYS8 1495 aaKnown RBP14.37□□□□□ -0.11
RN7SKP85-201ENST00000411349 MYO15BQ96JP2 1530 aa14.26□□□□□ -0.13
RN7SKP85-201ENST00000411349 DCAF1Q9Y4B6 1507 aa14.25□□□□□ -0.13
RN7SKP85-201ENST00000411349 NACADO15069 1562 aa14.23□□□□□ -0.13
RN7SKP85-201ENST00000411349 KCNA4P22459 653 aa14.18□□□□□ -0.14
RN7SKP85-201ENST00000411349 RB1CC1Q8TDY2 1594 aa14.17□□□□□ -0.14
RN7SKP85-201ENST00000411349 DCAF8L2P0C7V8 631 aa14.13□□□□□ -0.15
RN7SKP85-201ENST00000411349 PIAS4Q8N2W9 510 aaPredicted RBP13.96□□□□□ -0.17
RN7SKP85-201ENST00000411349 EHMT2Q96KQ7 1210 aa13.93□□□□□ -0.18
RN7SKP85-201ENST00000411349 PPP4R3CPQ6ZMV5 832 aa13.9□□□□□ -0.18
RN7SKP85-201ENST00000411349 UNC13AQ9UPW8 1703 aa13.88□□□□□ -0.19
RN7SKP85-201ENST00000411349 NCBP3Q53F19 620 aaKnown RBP13.85□□□□□ -0.19
RN7SKP85-201ENST00000411349 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
RN7SKP85-201ENST00000411349 BICRAQ9NZM4 1560 aa13.75□□□□□ -0.21
RN7SKP85-201ENST00000411349 SLC4A1APQ9BWU0 796 aaKnown RBP13.71□□□□□ -0.21
RN7SKP85-201ENST00000411349 SHROOM4Q9ULL8 1493 aa13.67□□□□□ -0.22
RN7SKP85-201ENST00000411349 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
RN7SKP85-201ENST00000411349 SCAF1Q9H7N4 1312 aaKnown RBP13.54□□□□□ -0.24
RN7SKP85-201ENST00000411349 CSRNP3Q8WYN3 585 aa13.5□□□□□ -0.25
RN7SKP85-201ENST00000411349 NPM3O75607 178 aaKnown RBP13.46□□□□□ -0.25
RN7SKP85-201ENST00000411349 CNKSR2Q8WXI2 1034 aa13.43□□□□□ -0.26
RN7SKP85-201ENST00000411349 EIF4G1Q04637 1599 aaKnown RBP13.37□□□□□ -0.27
RN7SKP85-201ENST00000411349 MSH5O43196 834 aa13.36□□□□□ -0.27
RN7SKP85-201ENST00000411349 CECR2Q9BXF3 1484 aa13.32□□□□□ -0.28
RN7SKP85-201ENST00000411349 BAZ1AQ9NRL2 1556 aaPredicted RBP13.29□□□□□ -0.28
RN7SKP85-201ENST00000411349 SMARCA4P51532 1647 aa13.28□□□□□ -0.28
RN7SKP85-201ENST00000411349 CC2D2AQ9P2K1 1620 aa13.24□□□□□ -0.29
RN7SKP85-201ENST00000411349 MROH2BQ7Z745 1585 aa13.21□□□□□ -0.29
RN7SKP85-201ENST00000411349 DNAJC5BQ9UF47 199 aa13.19□□□□□ -0.3
RN7SKP85-201ENST00000411349 PEG3Q9GZU2 1588 aa13.19□□□□□ -0.3
RN7SKP85-201ENST00000411349 RSF1Q96T23 1441 aaPredicted RBP13.15□□□□□ -0.3
RN7SKP85-201ENST00000411349 ATAD2BQ9ULI0 1458 aa13.15□□□□□ -0.3
RN7SKP85-201ENST00000411349 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
RN7SKP85-201ENST00000411349 NCAPD3P42695 1498 aa13.12□□□□□ -0.31
RN7SKP85-201ENST00000411349 HMGXB3Q12766 1538 aa13.09□□□□□ -0.31
RN7SKP85-201ENST00000411349 WIZO95785 1651 aa13.08□□□□□ -0.32
RN7SKP85-201ENST00000411349 BAZ1BQ9UIG0 1483 aaKnown RBP13.04□□□□□ -0.32
RN7SKP85-201ENST00000411349 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
RN7SKP85-201ENST00000411349 ZBTB22O15209 634 aa12.98□□□□□ -0.33
RN7SKP85-201ENST00000411349 TOP2AP11388 1531 aaKnown RBP12.98□□□□□ -0.33
RN7SKP85-201ENST00000411349 MAPK8IP2Q13387 824 aaPredicted RBP12.97□□□□□ -0.33
RN7SKP85-201ENST00000411349 FOXD4L1Q9NU39 408 aa12.97□□□□□ -0.33
RN7SKP85-201ENST00000411349 SUPT5HO00267 1087 aaKnown RBP12.89□□□□□ -0.35
RN7SKP85-201ENST00000411349 CCDC88BA6NC98 1476 aa12.8□□□□□ -0.36
RN7SKP85-201ENST00000411349 DMRT2Q9Y5R5 561 aa12.77□□□□□ -0.37
RN7SKP85-201ENST00000411349 HOXD11P31277 338 aaPredicted RBP12.76□□□□□ -0.37
RN7SKP85-201ENST00000411349 LAMC3Q9Y6N6 1575 aa12.74□□□□□ -0.37
RN7SKP85-201ENST00000411349 CADPSQ9ULU8 1353 aa12.73□□□□□ -0.37
RN7SKP85-201ENST00000411349 CFTRP13569 1480 aa12.72□□□□□ -0.37
RN7SKP85-201ENST00000411349 NESP48681 1621 aa12.7□□□□□ -0.38
RN7SKP85-201ENST00000411349 PRDM2Q13029 1718 aa12.67□□□□□ -0.38
RN7SKP85-201ENST00000411349 PDS5BQ9NTI5 1447 aa12.62□□□□□ -0.39
RN7SKP85-201ENST00000411349 FANCD2Q9BXW9 1451 aa12.58□□□□□ -0.4
RN7SKP85-201ENST00000411349 KIF21AQ7Z4S6 1674 aa12.57□□□□□ -0.4
RN7SKP85-201ENST00000411349 ATXN8OSP0DMR3 200 aa12.56□□□□□ -0.4
RN7SKP85-201ENST00000411349 ERCC6Q03468 1493 aa12.56□□□□□ -0.4
RN7SKP85-201ENST00000411349 CEP164Q9UPV0 1460 aa12.53□□□□□ -0.4
RN7SKP85-201ENST00000411349 SLC4A2P04920 1241 aa12.52□□□□□ -0.41
RN7SKP85-201ENST00000411349 MYCNP04198 464 aaPredicted RBP12.51□□□□□ -0.41
RN7SKP85-201ENST00000411349 THOC2Q8NI27 1593 aaKnown RBP12.5□□□□□ -0.41
RN7SKP85-201ENST00000411349 MRC2Q9UBG0 1479 aa12.48□□□□□ -0.41
RN7SKP85-201ENST00000411349 WDR62O43379 1518 aa12.46□□□□□ -0.42
RN7SKP85-201ENST00000411349 ABCC8Q09428 1581 aa12.44□□□□□ -0.42
RN7SKP85-201ENST00000411349 URB2Q14146 1524 aaKnown RBP12.44□□□□□ -0.42
RN7SKP85-201ENST00000411349 DNMBPQ6XZF7 1577 aa12.42□□□□□ -0.42
RN7SKP85-201ENST00000411349 TOPBP1Q92547 1522 aa12.41□□□□□ -0.42
RN7SKP85-201ENST00000411349 CUX2O14529 1486 aa12.4□□□□□ -0.42
RN7SKP85-201ENST00000411349 WRNQ14191 1432 aaPredicted RBP eCLIP12.38□□□□□ -0.43
RN7SKP85-201ENST00000411349 CUX1P39880 1505 aa12.38□□□□□ -0.43
RN7SKP85-201ENST00000411349 TOP2BQ02880 1626 aa12.36□□□□□ -0.43
RN7SKP85-201ENST00000411349 BIVM-ERCC5R4GMW8 1640 aa12.36□□□□□ -0.43
RN7SKP85-201ENST00000411349 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
RN7SKP85-201ENST00000411349 POLA1P09884 1462 aaPredicted RBP12.32□□□□□ -0.44
RN7SKP85-201ENST00000411349 FGD5Q6ZNL6 1462 aa12.31□□□□□ -0.44
RN7SKP85-201ENST00000411349 AMER1Q5JTC6 1135 aaPredicted RBP12.3□□□□□ -0.44
RN7SKP85-201ENST00000411349 IFT140Q96RY7 1462 aa12.29□□□□□ -0.44
RN7SKP85-201ENST00000411349 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
RN7SKP85-201ENST00000411349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.25□□□□□ -0.45
RN7SKP85-201ENST00000411349 HNRNPUL2Q1KMD3 747 aaKnown RBP12.25□□□□□ -0.45
RN7SKP85-201ENST00000411349 SOGA1O94964 1423 aa12.25□□□□□ -0.45
RN7SKP85-201ENST00000411349 WDR97A6NE52 1622 aa12.23□□□□□ -0.45
RN7SKP85-201ENST00000411349 ABCA10Q8WWZ4 1543 aa12.23□□□□□ -0.45
RN7SKP85-201ENST00000411349 RAD54L2Q9Y4B4 1467 aa12.23□□□□□ -0.45
RN7SKP85-201ENST00000411349 FKBP8Q14318 412 aa12.2□□□□□ -0.46
RN7SKP85-201ENST00000411349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.2□□□□□ -0.46
RN7SKP85-201ENST00000411349 DCAF8L1A6NGE4 600 aa12.19□□□□□ -0.46
RN7SKP85-201ENST00000411349 TRIM41Q8WV44 630 aa12.19□□□□□ -0.46
RN7SKP85-201ENST00000411349 ZNF608Q9ULD9 1512 aaPredicted RBP12.19□□□□□ -0.46
RN7SKP85-201ENST00000411349 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms