RNA–Protein interactions for RNA: ENST00000412553.5

LINC00652-201, long intergenic non-protein coding RNA 652, humanhuman

TSL 1 (best) BASIC

Gene LINC00652, Length 3,299 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00652-201ENST00000412553 NISCHQ9Y2I1 1504 aa14.77□□□□□ -0.05
LINC00652-201ENST00000412553 SHROOM4Q9ULL8 1493 aa12.8□□□□□ -0.36
LINC00652-201ENST00000412553 DCAF8L2P0C7V8 631 aa12.55□□□□□ -0.4
LINC00652-201ENST00000412553 CCDC180Q9P1Z9 1646 aa12.52□□□□□ -0.41
LINC00652-201ENST00000412553 SUPT5HO00267 1087 aaKnown RBP12.46□□□□□ -0.42
LINC00652-201ENST00000412553 ZCCHC6Q5VYS8 1495 aaKnown RBP12.45□□□□□ -0.42
LINC00652-201ENST00000412553 DCAF1Q9Y4B6 1507 aa11.97□□□□□ -0.49
LINC00652-201ENST00000412553 MYO15BQ96JP2 1530 aa11.95□□□□□ -0.5
LINC00652-201ENST00000412553 SCRIBQ14160 1630 aa11.94□□□□□ -0.5
LINC00652-201ENST00000412553 CHIC1Q5VXU3 224 aa11.93□□□□□ -0.5
LINC00652-201ENST00000412553 ABCC9O60706 1549 aa11.93□□□□□ -0.5
LINC00652-201ENST00000412553 PPARGC1BQ86YN6 1023 aaKnown RBP11.91□□□□□ -0.5
LINC00652-201ENST00000412553 PCGF6Q9BYE7 350 aa11.83□□□□□ -0.52
LINC00652-201ENST00000412553 HRCP23327 699 aa11.77□□□□□ -0.53
LINC00652-201ENST00000412553 LOC105371045A0A1W2PR82 267 aa11.7□□□□□ -0.54
LINC00652-201ENST00000412553 PELP1Q8IZL8 1130 aaKnown RBP11.7□□□□□ -0.54
LINC00652-201ENST00000412553 RSF1Q96T23 1441 aaPredicted RBP11.69□□□□□ -0.54
LINC00652-201ENST00000412553 CECR2Q9BXF3 1484 aa11.64□□□□□ -0.55
LINC00652-201ENST00000412553 RB1CC1Q8TDY2 1594 aa11.63□□□□□ -0.55
LINC00652-201ENST00000412553 EHMT2Q96KQ7 1210 aa11.61□□□□□ -0.55
LINC00652-201ENST00000412553 NACADO15069 1562 aa11.6□□□□□ -0.55
LINC00652-201ENST00000412553 FAM9AQ8IZU1 332 aaPredicted RBP11.57□□□□□ -0.56
LINC00652-201ENST00000412553 MROH2BQ7Z745 1585 aa11.55□□□□□ -0.56
LINC00652-201ENST00000412553 WIZO95785 1651 aa11.52□□□□□ -0.57
LINC00652-201ENST00000412553 TRIM41Q8WV44 630 aa11.5□□□□□ -0.57
LINC00652-201ENST00000412553 SCAF1Q9H7N4 1312 aaKnown RBP11.49□□□□□ -0.57
LINC00652-201ENST00000412553 PABPN1Q86U42 306 aaKnown RBP eCLIP11.45□□□□□ -0.58
LINC00652-201ENST00000412553 UNC13AQ9UPW8 1703 aa11.42□□□□□ -0.58
LINC00652-201ENST00000412553 TRIM26Q12899 539 aaPredicted RBP11.35□□□□□ -0.59
LINC00652-201ENST00000412553 BAZ1AQ9NRL2 1556 aaPredicted RBP11.33□□□□□ -0.6
LINC00652-201ENST00000412553 SMARCA4P51532 1647 aa11.29□□□□□ -0.6
LINC00652-201ENST00000412553 ABCC8Q09428 1581 aa11.27□□□□□ -0.6
LINC00652-201ENST00000412553 MYT1Q01538 1121 aa11.25□□□□□ -0.61
LINC00652-201ENST00000412553 BICRAQ9NZM4 1560 aa11.24□□□□□ -0.61
LINC00652-201ENST00000412553 CCDC88BA6NC98 1476 aa11.24□□□□□ -0.61
LINC00652-201ENST00000412553 TOP2AP11388 1531 aaKnown RBP11.22□□□□□ -0.61
LINC00652-201ENST00000412553 EIF4G1Q04637 1599 aaKnown RBP11.22□□□□□ -0.61
LINC00652-201ENST00000412553 SMARCA2P51531 1590 aa11.2□□□□□ -0.62
LINC00652-201ENST00000412553 TTBK1Q5TCY1 1321 aaPredicted RBP11.18□□□□□ -0.62
LINC00652-201ENST00000412553 SOGA1O94964 1423 aa11.12□□□□□ -0.63
LINC00652-201ENST00000412553 RUSC2Q8N2Y8 1516 aa11.1□□□□□ -0.63
LINC00652-201ENST00000412553 GTF3C3Q9Y5Q9 886 aa11.09□□□□□ -0.63
LINC00652-201ENST00000412553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.08□□□□□ -0.64
LINC00652-201ENST00000412553 ZEB1P37275 1124 aaPredicted RBP11.07□□□□□ -0.64
LINC00652-201ENST00000412553 NEUROD1Q13562 356 aa11.05□□□□□ -0.64
LINC00652-201ENST00000412553 BCL11AQ9H165 835 aa11.04□□□□□ -0.64
LINC00652-201ENST00000412553 ATAD2BQ9ULI0 1458 aa11.02□□□□□ -0.65
LINC00652-201ENST00000412553 BAZ1BQ9UIG0 1483 aaKnown RBP11.01□□□□□ -0.65
LINC00652-201ENST00000412553 UBTFP17480 764 aaKnown RBP11.01□□□□□ -0.65
LINC00652-201ENST00000412553 RANGAP1P46060 587 aaPredicted RBP11.01□□□□□ -0.65
LINC00652-201ENST00000412553 CCER1Q8TC90 406 aaPredicted RBP10.99□□□□□ -0.65
LINC00652-201ENST00000412553 SYNJ1O43426 1573 aa10.98□□□□□ -0.65
LINC00652-201ENST00000412553 WRNQ14191 1432 aaPredicted RBP eCLIP10.98□□□□□ -0.65
LINC00652-201ENST00000412553 PEG3Q9GZU2 1588 aa10.97□□□□□ -0.65
LINC00652-201ENST00000412553 PRKCSHP14314 528 aaPredicted RBP10.97□□□□□ -0.65
LINC00652-201ENST00000412553 CEP162Q5TB80 1403 aa10.97□□□□□ -0.65
LINC00652-201ENST00000412553 CSRNP3Q8WYN3 585 aa10.96□□□□□ -0.65
LINC00652-201ENST00000412553 YTHDC1Q96MU7 727 aaKnown RBP10.95□□□□□ -0.66
LINC00652-201ENST00000412553 ACIN1Q9UKV3 1341 aaKnown RBP10.92□□□□□ -0.66
LINC00652-201ENST00000412553 TNIKQ9UKE5 1360 aa10.87□□□□□ -0.67
LINC00652-201ENST00000412553 GOLGA3Q08378 1498 aa10.85□□□□□ -0.67
LINC00652-201ENST00000412553 DIEXFQ68CQ4 756 aaKnown RBP10.83□□□□□ -0.68
LINC00652-201ENST00000412553 RAPGEF2Q9Y4G8 1499 aa10.83□□□□□ -0.68
LINC00652-201ENST00000412553 EEA1Q15075 1411 aa10.82□□□□□ -0.68
LINC00652-201ENST00000412553 DNAJC5BQ9UF47 199 aa10.81□□□□□ -0.68
LINC00652-201ENST00000412553 CEP164Q9UPV0 1460 aa10.79□□□□□ -0.68
LINC00652-201ENST00000412553 CENPBP07199 599 aaPredicted RBP10.78□□□□□ -0.68
LINC00652-201ENST00000412553 CLIP1P30622 1438 aa10.77□□□□□ -0.68
LINC00652-201ENST00000412553 TOP2BQ02880 1626 aa10.77□□□□□ -0.69
LINC00652-201ENST00000412553 HNRNPUL2Q1KMD3 747 aaKnown RBP10.76□□□□□ -0.69
LINC00652-201ENST00000412553 NCAPD3P42695 1498 aa10.76□□□□□ -0.69
LINC00652-201ENST00000412553 KIF21BO75037 1637 aa10.75□□□□□ -0.69
LINC00652-201ENST00000412553 CUX1P39880 1505 aa10.75□□□□□ -0.69
LINC00652-201ENST00000412553 HMGXB3Q12766 1538 aa10.74□□□□□ -0.69
LINC00652-201ENST00000412553 BIVM-ERCC5R4GMW8 1640 aa10.72□□□□□ -0.69
LINC00652-201ENST00000412553 CFTRP13569 1480 aa10.68□□□□□ -0.7
LINC00652-201ENST00000412553 VPS8Q8N3P4 1428 aa10.67□□□□□ -0.7
LINC00652-201ENST00000412553 APLP2Q06481 763 aa10.67□□□□□ -0.7
LINC00652-201ENST00000412553 CC2D2AQ9P2K1 1620 aa10.66□□□□□ -0.7
LINC00652-201ENST00000412553 ZNF316A6NFI3 1004 aaPredicted RBP10.64□□□□□ -0.71
LINC00652-201ENST00000412553 PRXQ9BXM0 1461 aa10.63□□□□□ -0.71
LINC00652-201ENST00000412553 KANK4Q5T7N3 995 aaPredicted RBP10.62□□□□□ -0.71
LINC00652-201ENST00000412553 KIF27Q86VH2 1401 aa10.62□□□□□ -0.71
LINC00652-201ENST00000412553 MIER1Q8N108 512 aa10.62□□□□□ -0.71
LINC00652-201ENST00000412553 CUX2O14529 1486 aa10.61□□□□□ -0.71
LINC00652-201ENST00000412553 ARAP1Q96P48 1450 aa10.61□□□□□ -0.71
LINC00652-201ENST00000412553 NESP48681 1621 aa10.61□□□□□ -0.71
LINC00652-201ENST00000412553 CADPSQ9ULU8 1353 aa10.6□□□□□ -0.71
LINC00652-201ENST00000412553 FGD5Q6ZNL6 1462 aa10.58□□□□□ -0.72
LINC00652-201ENST00000412553 P3H3Q8IVL6 736 aa10.58□□□□□ -0.72
LINC00652-201ENST00000412553 ITGAEP38570 1179 aa10.57□□□□□ -0.72
LINC00652-201ENST00000412553 ERICH3Q5RHP9 1530 aa10.57□□□□□ -0.72
LINC00652-201ENST00000412553 PRDM2Q13029 1718 aa10.57□□□□□ -0.72
LINC00652-201ENST00000412553 ANP32EQ9BTT0 268 aa10.55□□□□□ -0.72
LINC00652-201ENST00000412553 RAD54L2Q9Y4B4 1467 aa10.55□□□□□ -0.72
LINC00652-201ENST00000412553 FANCD2Q9BXW9 1451 aa10.54□□□□□ -0.72
LINC00652-201ENST00000412553 IGF1RP08069 1367 aa10.54□□□□□ -0.72
LINC00652-201ENST00000412553 ARHGAP35Q9NRY4 1499 aa10.54□□□□□ -0.72
LINC00652-201ENST00000412553 ATP1B4Q9UN42 357 aaPredicted RBP10.53□□□□□ -0.72
LINC00652-201ENST00000412553 CARMIL1Q5VZK9 1371 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms