RNA–Protein interactions for RNA: ENST00000359156.8

CD163-201, Transcript of CD163 molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD163, Length 4,268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD163-201ENST00000359156 NISCHQ9Y2I1 1504 aa12.93□□□□□ -0.34
CD163-201ENST00000359156 DCAF8L2P0C7V8 631 aa12.93□□□□□ -0.34
CD163-201ENST00000359156 SUPT5HO00267 1087 aaKnown RBP11.98□□□□□ -0.49
CD163-201ENST00000359156 SHROOM4Q9ULL8 1493 aa11.91□□□□□ -0.5
CD163-201ENST00000359156 FAM9AQ8IZU1 332 aaPredicted RBP11.44□□□□□ -0.58
CD163-201ENST00000359156 EHMT2Q96KQ7 1210 aa11.36□□□□□ -0.59
CD163-201ENST00000359156 APLP2Q06481 763 aa11.36□□□□□ -0.59
CD163-201ENST00000359156 HRCP23327 699 aa11.27□□□□□ -0.61
CD163-201ENST00000359156 ABCC9O60706 1549 aa11.26□□□□□ -0.61
CD163-201ENST00000359156 PELP1Q8IZL8 1130 aaKnown RBP11.23□□□□□ -0.61
CD163-201ENST00000359156 TRIM41Q8WV44 630 aa11.21□□□□□ -0.61
CD163-201ENST00000359156 PCGF6Q9BYE7 350 aa11.21□□□□□ -0.62
CD163-201ENST00000359156 UBTFP17480 764 aaKnown RBP11.05□□□□□ -0.64
CD163-201ENST00000359156 RANGAP1P46060 587 aaPredicted RBP11.05□□□□□ -0.64
CD163-201ENST00000359156 PABPN1Q86U42 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
CD163-201ENST00000359156 PPARGC1BQ86YN6 1023 aaKnown RBP11.03□□□□□ -0.64
CD163-201ENST00000359156 ATP1B4Q9UN42 357 aaPredicted RBP11.02□□□□□ -0.64
CD163-201ENST00000359156 TTBK1Q5TCY1 1321 aaPredicted RBP10.93□□□□□ -0.66
CD163-201ENST00000359156 MYT1Q01538 1121 aa10.9□□□□□ -0.66
CD163-201ENST00000359156 ZEB1P37275 1124 aaPredicted RBP10.84□□□□□ -0.67
CD163-201ENST00000359156 CHIC1Q5VXU3 224 aa10.81□□□□□ -0.68
CD163-201ENST00000359156 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.78□□□□□ -0.68
CD163-201ENST00000359156 HNRNPUL2Q1KMD3 747 aaKnown RBP10.78□□□□□ -0.68
CD163-201ENST00000359156 CCDC180Q9P1Z9 1646 aa10.78□□□□□ -0.68
CD163-201ENST00000359156 TRIM26Q12899 539 aaPredicted RBP10.76□□□□□ -0.69
CD163-201ENST00000359156 MYT1LQ9UL68 1186 aa10.7□□□□□ -0.7
CD163-201ENST00000359156 ZCCHC6Q5VYS8 1495 aaKnown RBP10.68□□□□□ -0.7
CD163-201ENST00000359156 CCER1Q8TC90 406 aaPredicted RBP10.67□□□□□ -0.7
CD163-201ENST00000359156 SCRIBQ14160 1630 aa10.67□□□□□ -0.7
CD163-201ENST00000359156 CENPBP07199 599 aaPredicted RBP10.67□□□□□ -0.7
CD163-201ENST00000359156 LOC105371045A0A1W2PR82 267 aa10.66□□□□□ -0.7
CD163-201ENST00000359156 SCAF1Q9H7N4 1312 aaKnown RBP10.62□□□□□ -0.71
CD163-201ENST00000359156 RB1CC1Q8TDY2 1594 aa10.61□□□□□ -0.71
CD163-201ENST00000359156 FBLN2P98095 1184 aa10.59□□□□□ -0.71
CD163-201ENST00000359156 MYO15BQ96JP2 1530 aa10.58□□□□□ -0.72
CD163-201ENST00000359156 ITGAEP38570 1179 aa10.54□□□□□ -0.72
CD163-201ENST00000359156 DCAF1Q9Y4B6 1507 aa10.53□□□□□ -0.72
CD163-201ENST00000359156 NACADO15069 1562 aa10.52□□□□□ -0.73
CD163-201ENST00000359156 ACIN1Q9UKV3 1341 aaKnown RBP10.49□□□□□ -0.73
CD163-201ENST00000359156 GTF3C3Q9Y5Q9 886 aa10.48□□□□□ -0.73
CD163-201ENST00000359156 CSRNP3Q8WYN3 585 aa10.43□□□□□ -0.74
CD163-201ENST00000359156 YTHDC1Q96MU7 727 aaKnown RBP10.4□□□□□ -0.74
CD163-201ENST00000359156 NEUROD1Q13562 356 aa10.4□□□□□ -0.75
CD163-201ENST00000359156 DIEXFQ68CQ4 756 aaKnown RBP10.39□□□□□ -0.75
CD163-201ENST00000359156 FAM50AQ14320 339 aaKnown RBP10.38□□□□□ -0.75
CD163-201ENST00000359156 CDK11AQ9UQ88 783 aaPredicted RBP10.36□□□□□ -0.75
CD163-201ENST00000359156 NPM1P06748 294 aaKnown RBP eCLIP10.34□□□□□ -0.75
CD163-201ENST00000359156 P3H3Q8IVL6 736 aa10.31□□□□□ -0.76
CD163-201ENST00000359156 TRIM52Q96A61 297 aa10.3□□□□□ -0.76
CD163-201ENST00000359156 POLR3GLQ9BT43 218 aa10.3□□□□□ -0.76
CD163-201ENST00000359156 BAZ1BQ9UIG0 1483 aaKnown RBP10.28□□□□□ -0.76
CD163-201ENST00000359156 CHMP7Q8WUX9 453 aaPredicted RBP10.27□□□□□ -0.77
CD163-201ENST00000359156 ARID3CA6NKF2 412 aa10.25□□□□□ -0.77
CD163-201ENST00000359156 RSF1Q96T23 1441 aaPredicted RBP10.24□□□□□ -0.77
CD163-201ENST00000359156 NEFLP07196 543 aa10.22□□□□□ -0.77
CD163-201ENST00000359156 BAZ1AQ9NRL2 1556 aaPredicted RBP10.21□□□□□ -0.78
CD163-201ENST00000359156 ESF1Q9H501 851 aaKnown RBP10.2□□□□□ -0.78
CD163-201ENST00000359156 SLC4A1APQ9BWU0 796 aaKnown RBP10.2□□□□□ -0.78
CD163-201ENST00000359156 ZNF777Q9ULD5 760 aaPredicted RBP10.2□□□□□ -0.78
CD163-201ENST00000359156 ERCC6Q03468 1493 aa10.18□□□□□ -0.78
CD163-201ENST00000359156 ZNF316A6NFI3 1004 aaPredicted RBP10.14□□□□□ -0.79
CD163-201ENST00000359156 WRNQ14191 1432 aaPredicted RBP eCLIP10.12□□□□□ -0.79
CD163-201ENST00000359156 EEA1Q15075 1411 aa10.12□□□□□ -0.79
CD163-201ENST00000359156 BCANQ96GW7 911 aa10.11□□□□□ -0.79
CD163-201ENST00000359156 ERICH6Q7L0X2 663 aa10.1□□□□□ -0.79
CD163-201ENST00000359156 CNGB1Q14028 1251 aaPredicted RBP10.09□□□□□ -0.79
CD163-201ENST00000359156 ZNF326Q5BKZ1 582 aaKnown RBP10.09□□□□□ -0.79
CD163-201ENST00000359156 CECR2Q9BXF3 1484 aa10.09□□□□□ -0.79
CD163-201ENST00000359156 KIF27Q86VH2 1401 aa10.08□□□□□ -0.8
CD163-201ENST00000359156 TSPY4P0CV99 314 aa10.07□□□□□ -0.8
CD163-201ENST00000359156 TSPY10P0CW01 314 aa10.07□□□□□ -0.8
CD163-201ENST00000359156 MTUS2Q5JR59 1369 aa10.06□□□□□ -0.8
CD163-201ENST00000359156 SMARCA2P51531 1590 aa10.05□□□□□ -0.8
CD163-201ENST00000359156 STAG3Q9UJ98 1225 aa10.05□□□□□ -0.8
CD163-201ENST00000359156 PLEKHD1A6NEE1 506 aa10.04□□□□□ -0.8
CD163-201ENST00000359156 PDS5BQ9NTI5 1447 aa10.04□□□□□ -0.8
CD163-201ENST00000359156 CLIP1P30622 1438 aa10.01□□□□□ -0.81
CD163-201ENST00000359156 MIER1Q8N108 512 aa10□□□□□ -0.81
CD163-201ENST00000359156 CHGAP10645 457 aaKnown RBP10□□□□□ -0.81
CD163-201ENST00000359156 KCNH8Q96L42 1107 aa9.99□□□□□ -0.81
CD163-201ENST00000359156 GOLGA3Q08378 1498 aa9.98□□□□□ -0.81
CD163-201ENST00000359156 ANP32EQ9BTT0 268 aa9.96□□□□□ -0.81
CD163-201ENST00000359156 CLSPNQ9HAW4 1339 aa9.96□□□□□ -0.81
CD163-201ENST00000359156 PLPPR3Q6T4P5 718 aa9.95□□□□□ -0.82
CD163-201ENST00000359156 MROH2BQ7Z745 1585 aa9.95□□□□□ -0.82
CD163-201ENST00000359156 BCL11AQ9H165 835 aa9.95□□□□□ -0.82
CD163-201ENST00000359156 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.94□□□□□ -0.82
CD163-201ENST00000359156 CHIC2Q9UKJ5 165 aa9.94□□□□□ -0.82
CD163-201ENST00000359156 CEP164Q9UPV0 1460 aa9.94□□□□□ -0.82
CD163-201ENST00000359156 NEFMP07197 916 aa9.93□□□□□ -0.82
CD163-201ENST00000359156 CUX2O14529 1486 aa9.92□□□□□ -0.82
CD163-201ENST00000359156 CADPSQ9ULU8 1353 aa9.92□□□□□ -0.82
CD163-201ENST00000359156 CARMIL1Q5VZK9 1371 aa9.91□□□□□ -0.82
CD163-201ENST00000359156 TONSLQ96HA7 1378 aa9.91□□□□□ -0.82
CD163-201ENST00000359156 ANP32CO43423 234 aa9.91□□□□□ -0.82
CD163-201ENST00000359156 CFDP1Q9UEE9 299 aaPredicted RBP9.9□□□□□ -0.83
CD163-201ENST00000359156 CCDC88BA6NC98 1476 aa9.89□□□□□ -0.83
CD163-201ENST00000359156 ATAD2BQ9ULI0 1458 aa9.88□□□□□ -0.83
CD163-201ENST00000359156 TNIKQ9UKE5 1360 aa9.88□□□□□ -0.83
CD163-201ENST00000359156 SOGA1O94964 1423 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms