RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 AEBP2Q6ZN18 517 aaPredicted RBP24.54■■□□□ 1.52
CASP4-201ENST00000393150 CHIC1Q5VXU3 224 aa24.24■■□□□ 1.47
CASP4-201ENST00000393150 PHF23Q9BUL5 403 aaPredicted RBP21.43■■□□□ 1.02
CASP4-201ENST00000393150 SENP3Q9H4L4 574 aaPredicted RBP20.63■□□□□ 0.89
CASP4-201ENST00000393150 PLPPR3Q6T4P5 718 aa19.77■□□□□ 0.76
CASP4-201ENST00000393150 NISCHQ9Y2I1 1504 aa19.67■□□□□ 0.74
CASP4-201ENST00000393150 FOXD1Q16676 465 aa19.21■□□□□ 0.67
CASP4-201ENST00000393150 PPP6R1Q9UPN7 881 aa18.79■□□□□ 0.6
CASP4-201ENST00000393150 ADRA2BP18089 450 aa18.74■□□□□ 0.59
CASP4-201ENST00000393150 POTEDQ86YR6 584 aa18.34■□□□□ 0.53
CASP4-201ENST00000393150 ABCC9O60706 1549 aa18.29■□□□□ 0.52
CASP4-201ENST00000393150 MSH5O43196 834 aa18.13■□□□□ 0.49
CASP4-201ENST00000393150 PIAS4Q8N2W9 510 aaPredicted RBP18.1■□□□□ 0.49
CASP4-201ENST00000393150 CCDC180Q9P1Z9 1646 aa17.8■□□□□ 0.44
CASP4-201ENST00000393150 KCNA4P22459 653 aa17.54■□□□□ 0.4
CASP4-201ENST00000393150 PPP4R3CPQ6ZMV5 832 aa17.51■□□□□ 0.39
CASP4-201ENST00000393150 DNAJC5BQ9UF47 199 aa17.48■□□□□ 0.39
CASP4-201ENST00000393150 RB1CC1Q8TDY2 1594 aa17.25■□□□□ 0.35
CASP4-201ENST00000393150 DCAF8L2P0C7V8 631 aa17.09■□□□□ 0.33
CASP4-201ENST00000393150 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
CASP4-201ENST00000393150 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
CASP4-201ENST00000393150 NACADO15069 1562 aa17.02■□□□□ 0.32
CASP4-201ENST00000393150 SCAF1Q9H7N4 1312 aaKnown RBP17■□□□□ 0.31
CASP4-201ENST00000393150 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
CASP4-201ENST00000393150 MAPK8IP2Q13387 824 aaPredicted RBP16.93■□□□□ 0.3
CASP4-201ENST00000393150 CNKSR2Q8WXI2 1034 aa16.92■□□□□ 0.3
CASP4-201ENST00000393150 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
CASP4-201ENST00000393150 EHMT2Q96KQ7 1210 aa16.63■□□□□ 0.25
CASP4-201ENST00000393150 UNC13AQ9UPW8 1703 aa16.62■□□□□ 0.25
CASP4-201ENST00000393150 MYO15BQ96JP2 1530 aa16.61■□□□□ 0.25
CASP4-201ENST00000393150 BICRAQ9NZM4 1560 aa16.58■□□□□ 0.24
CASP4-201ENST00000393150 CECR2Q9BXF3 1484 aa16.57■□□□□ 0.24
CASP4-201ENST00000393150 DMRT2Q9Y5R5 561 aa16.56■□□□□ 0.24
CASP4-201ENST00000393150 DNAJC5Q9H3Z4 198 aa16.53■□□□□ 0.24
CASP4-201ENST00000393150 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
CASP4-201ENST00000393150 SHROOM4Q9ULL8 1493 aa16.5■□□□□ 0.23
CASP4-201ENST00000393150 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
CASP4-201ENST00000393150 HOXD11P31277 338 aaPredicted RBP16.39■□□□□ 0.21
CASP4-201ENST00000393150 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
CASP4-201ENST00000393150 EIF4G1Q04637 1599 aaKnown RBP16.31■□□□□ 0.2
CASP4-201ENST00000393150 DCAF1Q9Y4B6 1507 aa16.22■□□□□ 0.19
CASP4-201ENST00000393150 ZBTB22O15209 634 aa16.21■□□□□ 0.19
CASP4-201ENST00000393150 SCRIBQ14160 1630 aa16.21■□□□□ 0.19
CASP4-201ENST00000393150 ZCCHC6Q5VYS8 1495 aaKnown RBP16.16■□□□□ 0.18
CASP4-201ENST00000393150 CUX2O14529 1486 aa16■□□□□ 0.15
CASP4-201ENST00000393150 FOXD4L1Q9NU39 408 aa15.98■□□□□ 0.15
CASP4-201ENST00000393150 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
CASP4-201ENST00000393150 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
CASP4-201ENST00000393150 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
CASP4-201ENST00000393150 DCAF8L1A6NGE4 600 aa15.71■□□□□ 0.11
CASP4-201ENST00000393150 NCAPD3P42695 1498 aa15.71■□□□□ 0.11
CASP4-201ENST00000393150 TRIM41Q8WV44 630 aa15.7■□□□□ 0.1
CASP4-201ENST00000393150 SMARCA2P51531 1590 aa15.57■□□□□ 0.08
CASP4-201ENST00000393150 ATAD2BQ9ULI0 1458 aa15.57■□□□□ 0.08
CASP4-201ENST00000393150 MYCNP04198 464 aaPredicted RBP15.57■□□□□ 0.08
CASP4-201ENST00000393150 NESP48681 1621 aa15.52■□□□□ 0.07
CASP4-201ENST00000393150 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.51■□□□□ 0.07
CASP4-201ENST00000393150 HMGXB3Q12766 1538 aa15.51■□□□□ 0.07
CASP4-201ENST00000393150 PDS5BQ9NTI5 1447 aa15.48■□□□□ 0.07
CASP4-201ENST00000393150 BAZ1BQ9UIG0 1483 aaKnown RBP15.46■□□□□ 0.07
CASP4-201ENST00000393150 RNF39Q9H2S5 420 aa15.43■□□□□ 0.06
CASP4-201ENST00000393150 LAMC3Q9Y6N6 1575 aa15.42■□□□□ 0.06
CASP4-201ENST00000393150 U3KPZ7 1027 aaPredicted RBP15.41■□□□□ 0.06
CASP4-201ENST00000393150 SMARCA4P51532 1647 aa15.39■□□□□ 0.05
CASP4-201ENST00000393150 THOC2Q8NI27 1593 aaKnown RBP15.39■□□□□ 0.05
CASP4-201ENST00000393150 ATXN8OSP0DMR3 200 aa15.39■□□□□ 0.05
CASP4-201ENST00000393150 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
CASP4-201ENST00000393150 BAZ1AQ9NRL2 1556 aaPredicted RBP15.35■□□□□ 0.05
CASP4-201ENST00000393150 CADPSQ9ULU8 1353 aa15.27■□□□□ 0.03
CASP4-201ENST00000393150 MRC2Q9UBG0 1479 aa15.26■□□□□ 0.03
CASP4-201ENST00000393150 KIF21AQ7Z4S6 1674 aa15.26■□□□□ 0.03
CASP4-201ENST00000393150 ATF5Q9Y2D1 282 aaPredicted RBP15.24■□□□□ 0.03
CASP4-201ENST00000393150 PEG3Q9GZU2 1588 aa15.23■□□□□ 0.03
CASP4-201ENST00000393150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
CASP4-201ENST00000393150 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
CASP4-201ENST00000393150 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
CASP4-201ENST00000393150 SAMD1Q6SPF0 538 aaPredicted RBP15.18■□□□□ 0.02
CASP4-201ENST00000393150 WDR62O43379 1518 aa15.17■□□□□ 0.02
CASP4-201ENST00000393150 CEP164Q9UPV0 1460 aa15.14■□□□□ 0.01
CASP4-201ENST00000393150 MROH2BQ7Z745 1585 aa15.1■□□□□ 0.01
CASP4-201ENST00000393150 FANCD2Q9BXW9 1451 aa15.06■□□□□ 0
CASP4-201ENST00000393150 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
CASP4-201ENST00000393150 CYB5RLQ6IPT4 315 aa14.99□□□□□ -0.01
CASP4-201ENST00000393150 RIMBP3CA6NJZ7 1639 aa14.94□□□□□ -0.02
CASP4-201ENST00000393150 RIMBP3BA6NNM3 1639 aa14.94□□□□□ -0.02
CASP4-201ENST00000393150 RIMBP3Q9UFD9 1639 aa14.94□□□□□ -0.02
CASP4-201ENST00000393150 CFTRP13569 1480 aa14.94□□□□□ -0.02
CASP4-201ENST00000393150 APLP2Q06481 763 aa14.91□□□□□ -0.02
CASP4-201ENST00000393150 ARHGEF11O15085 1522 aa14.89□□□□□ -0.03
CASP4-201ENST00000393150 SPINK5Q9NQ38 1064 aaPredicted RBP14.88□□□□□ -0.03
CASP4-201ENST00000393150 ZNF219Q9P2Y4 722 aaPredicted RBP14.88□□□□□ -0.03
CASP4-201ENST00000393150 WIZO95785 1651 aa14.88□□□□□ -0.03
CASP4-201ENST00000393150 URB2Q14146 1524 aaKnown RBP14.87□□□□□ -0.03
CASP4-201ENST00000393150 IFT140Q96RY7 1462 aa14.86□□□□□ -0.03
CASP4-201ENST00000393150 FBLN2P98095 1184 aa14.85□□□□□ -0.03
CASP4-201ENST00000393150 ABCC8Q09428 1581 aa14.77□□□□□ -0.05
CASP4-201ENST00000393150 ZNF608Q9ULD9 1512 aaPredicted RBP14.76□□□□□ -0.05
CASP4-201ENST00000393150 TOP2AP11388 1531 aaKnown RBP14.73□□□□□ -0.05
CASP4-201ENST00000393150 RSF1Q96T23 1441 aaPredicted RBP14.72□□□□□ -0.05
CASP4-201ENST00000393150 CAPN15O75808 1086 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms