RNA–Protein interactions for RNA: ENST00000556933.1

AL049869.1-201, humanhuman

BASIC

Gene AL049869.1, Length 1,402 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049869.1-201ENST00000556933 AEBP2Q6ZN18 517 aaPredicted RBP27.18■■□□□ 1.94
AL049869.1-201ENST00000556933 CHIC1Q5VXU3 224 aa26.43■■□□□ 1.82
AL049869.1-201ENST00000556933 PHF23Q9BUL5 403 aaPredicted RBP23.29■■□□□ 1.32
AL049869.1-201ENST00000556933 SENP3Q9H4L4 574 aaPredicted RBP22.99■■□□□ 1.27
AL049869.1-201ENST00000556933 FOXD1Q16676 465 aa21.41■■□□□ 1.02
AL049869.1-201ENST00000556933 PLPPR3Q6T4P5 718 aa21.41■■□□□ 1.02
AL049869.1-201ENST00000556933 NISCHQ9Y2I1 1504 aa20.62■□□□□ 0.89
AL049869.1-201ENST00000556933 PPP6R1Q9UPN7 881 aa20.59■□□□□ 0.89
AL049869.1-201ENST00000556933 ADRA2BP18089 450 aa20.57■□□□□ 0.88
AL049869.1-201ENST00000556933 PIAS4Q8N2W9 510 aaPredicted RBP20.17■□□□□ 0.82
AL049869.1-201ENST00000556933 MSH5O43196 834 aa19.69■□□□□ 0.74
AL049869.1-201ENST00000556933 ABCC9O60706 1549 aa19.33■□□□□ 0.68
AL049869.1-201ENST00000556933 PPP4R3CPQ6ZMV5 832 aa18.9■□□□□ 0.62
AL049869.1-201ENST00000556933 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
AL049869.1-201ENST00000556933 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
AL049869.1-201ENST00000556933 MAPK8IP2Q13387 824 aaPredicted RBP18.7■□□□□ 0.58
AL049869.1-201ENST00000556933 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
AL049869.1-201ENST00000556933 KCNA4P22459 653 aa18.42■□□□□ 0.54
AL049869.1-201ENST00000556933 DMRT2Q9Y5R5 561 aa18.36■□□□□ 0.53
AL049869.1-201ENST00000556933 CNKSR2Q8WXI2 1034 aa18.34■□□□□ 0.53
AL049869.1-201ENST00000556933 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
AL049869.1-201ENST00000556933 RB1CC1Q8TDY2 1594 aa18.17■□□□□ 0.5
AL049869.1-201ENST00000556933 NPM3O75607 178 aaKnown RBP18.12■□□□□ 0.49
AL049869.1-201ENST00000556933 POTEDQ86YR6 584 aa18.12■□□□□ 0.49
AL049869.1-201ENST00000556933 RNF216Q9NWF9 866 aaPredicted RBP17.99■□□□□ 0.47
AL049869.1-201ENST00000556933 HOXD11P31277 338 aaPredicted RBP17.95■□□□□ 0.46
AL049869.1-201ENST00000556933 NACADO15069 1562 aa17.9■□□□□ 0.46
AL049869.1-201ENST00000556933 PABPN1Q86U42 306 aaKnown RBP eCLIP17.88■□□□□ 0.45
AL049869.1-201ENST00000556933 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
AL049869.1-201ENST00000556933 BICRAQ9NZM4 1560 aa17.69■□□□□ 0.42
AL049869.1-201ENST00000556933 DCAF8L1A6NGE4 600 aa17.64■□□□□ 0.41
AL049869.1-201ENST00000556933 DNAJC5Q9H3Z4 198 aa17.62■□□□□ 0.41
AL049869.1-201ENST00000556933 DCAF8L2P0C7V8 631 aa17.61■□□□□ 0.41
AL049869.1-201ENST00000556933 SLC4A1APQ9BWU0 796 aaKnown RBP17.49■□□□□ 0.39
AL049869.1-201ENST00000556933 CECR2Q9BXF3 1484 aa17.48■□□□□ 0.39
AL049869.1-201ENST00000556933 CC2D2AQ9P2K1 1620 aa17.47■□□□□ 0.39
AL049869.1-201ENST00000556933 MYO15BQ96JP2 1530 aa17.46■□□□□ 0.39
AL049869.1-201ENST00000556933 SHROOM4Q9ULL8 1493 aa17.36■□□□□ 0.37
AL049869.1-201ENST00000556933 EIF4G1Q04637 1599 aaKnown RBP17.27■□□□□ 0.36
AL049869.1-201ENST00000556933 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
AL049869.1-201ENST00000556933 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.33
AL049869.1-201ENST00000556933 SCRIBQ14160 1630 aa17.05■□□□□ 0.32
AL049869.1-201ENST00000556933 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
AL049869.1-201ENST00000556933 EHMT2Q96KQ7 1210 aa16.98■□□□□ 0.31
AL049869.1-201ENST00000556933 ZBTB22O15209 634 aa16.96■□□□□ 0.31
AL049869.1-201ENST00000556933 ZCCHC6Q5VYS8 1495 aaKnown RBP16.95■□□□□ 0.3
AL049869.1-201ENST00000556933 CUX2O14529 1486 aa16.93■□□□□ 0.3
AL049869.1-201ENST00000556933 FOXD4L1Q9NU39 408 aa16.92■□□□□ 0.3
AL049869.1-201ENST00000556933 RNF39Q9H2S5 420 aa16.9■□□□□ 0.3
AL049869.1-201ENST00000556933 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
AL049869.1-201ENST00000556933 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
AL049869.1-201ENST00000556933 ERCC6Q03468 1493 aa16.71■□□□□ 0.27
AL049869.1-201ENST00000556933 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
AL049869.1-201ENST00000556933 C1QBPQ07021 282 aaKnown RBP16.66■□□□□ 0.26
AL049869.1-201ENST00000556933 TRIM41Q8WV44 630 aa16.54■□□□□ 0.24
AL049869.1-201ENST00000556933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.53■□□□□ 0.24
AL049869.1-201ENST00000556933 HNRNPUL2Q1KMD3 747 aaKnown RBP16.53■□□□□ 0.24
AL049869.1-201ENST00000556933 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
AL049869.1-201ENST00000556933 CACNB1Q02641 598 aaPredicted RBP16.53■□□□□ 0.24
AL049869.1-201ENST00000556933 SAMD1Q6SPF0 538 aaPredicted RBP16.5■□□□□ 0.23
AL049869.1-201ENST00000556933 NESP48681 1621 aa16.45■□□□□ 0.22
AL049869.1-201ENST00000556933 SPINK5Q9NQ38 1064 aaPredicted RBP16.45■□□□□ 0.22
AL049869.1-201ENST00000556933 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
AL049869.1-201ENST00000556933 ATAD2BQ9ULI0 1458 aa16.37■□□□□ 0.21
AL049869.1-201ENST00000556933 CAPN15O75808 1086 aa16.36■□□□□ 0.21
AL049869.1-201ENST00000556933 APLP2Q06481 763 aa16.35■□□□□ 0.21
AL049869.1-201ENST00000556933 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
AL049869.1-201ENST00000556933 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
AL049869.1-201ENST00000556933 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
AL049869.1-201ENST00000556933 ATXN8OSP0DMR3 200 aa16.28■□□□□ 0.2
AL049869.1-201ENST00000556933 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
AL049869.1-201ENST00000556933 KIF21AQ7Z4S6 1674 aa16.27■□□□□ 0.2
AL049869.1-201ENST00000556933 LAMC3Q9Y6N6 1575 aa16.26■□□□□ 0.19
AL049869.1-201ENST00000556933 SMARCA4P51532 1647 aa16.22■□□□□ 0.19
AL049869.1-201ENST00000556933 ZNF219Q9P2Y4 722 aaPredicted RBP16.19■□□□□ 0.18
AL049869.1-201ENST00000556933 BAZ1BQ9UIG0 1483 aaKnown RBP16.17■□□□□ 0.18
AL049869.1-201ENST00000556933 PDS5BQ9NTI5 1447 aa16.15■□□□□ 0.18
AL049869.1-201ENST00000556933 BAZ1AQ9NRL2 1556 aaPredicted RBP16.12■□□□□ 0.17
AL049869.1-201ENST00000556933 DSG3P32926 999 aa16.09■□□□□ 0.17
AL049869.1-201ENST00000556933 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
AL049869.1-201ENST00000556933 ABCB7O75027 752 aa16.08■□□□□ 0.16
AL049869.1-201ENST00000556933 MRC2Q9UBG0 1479 aa16.06■□□□□ 0.16
AL049869.1-201ENST00000556933 WDR62O43379 1518 aa16.05■□□□□ 0.16
AL049869.1-201ENST00000556933 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
AL049869.1-201ENST00000556933 POLA2Q14181 598 aa15.98■□□□□ 0.15
AL049869.1-201ENST00000556933 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
AL049869.1-201ENST00000556933 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
AL049869.1-201ENST00000556933 RIMBP3BA6NNM3 1639 aa15.94■□□□□ 0.14
AL049869.1-201ENST00000556933 RIMBP3Q9UFD9 1639 aa15.94■□□□□ 0.14
AL049869.1-201ENST00000556933 MROH2BQ7Z745 1585 aa15.88■□□□□ 0.13
AL049869.1-201ENST00000556933 CEP164Q9UPV0 1460 aa15.86■□□□□ 0.13
AL049869.1-201ENST00000556933 ARHGEF11O15085 1522 aa15.8■□□□□ 0.12
AL049869.1-201ENST00000556933 FANCD2Q9BXW9 1451 aa15.79■□□□□ 0.12
AL049869.1-201ENST00000556933 URB2Q14146 1524 aaKnown RBP15.71■□□□□ 0.11
AL049869.1-201ENST00000556933 CYB5RLQ6IPT4 315 aa15.69■□□□□ 0.1
AL049869.1-201ENST00000556933 WIZO95785 1651 aa15.69■□□□□ 0.1
AL049869.1-201ENST00000556933 CFTRP13569 1480 aa15.67■□□□□ 0.1
AL049869.1-201ENST00000556933 MKRN4PQ13434 485 aaPredicted RBP15.61■□□□□ 0.09
AL049869.1-201ENST00000556933 ZBTB12Q9Y330 459 aaPredicted RBP15.61■□□□□ 0.09
AL049869.1-201ENST00000556933 ZNF608Q9ULD9 1512 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms