RNA–Protein interactions for RNA: ENST00000530997.6

NIN-217, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 8,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-217ENST00000530997 NISCHQ9Y2I1 1504 aa11.6□□□□□ -0.55
NIN-217ENST00000530997 PELP1Q8IZL8 1130 aaKnown RBP11.42□□□□□ -0.58
NIN-217ENST00000530997 DCAF8L2P0C7V8 631 aa11.36□□□□□ -0.59
NIN-217ENST00000530997 CCER1Q8TC90 406 aaPredicted RBP10.87□□□□□ -0.67
NIN-217ENST00000530997 SUPT5HO00267 1087 aaKnown RBP10.83□□□□□ -0.67
NIN-217ENST00000530997 APLP2Q06481 763 aa10.83□□□□□ -0.68
NIN-217ENST00000530997 FAM9AQ8IZU1 332 aaPredicted RBP10.83□□□□□ -0.68
NIN-217ENST00000530997 ERICH6Q7L0X2 663 aa10.78□□□□□ -0.68
NIN-217ENST00000530997 MYT1Q01538 1121 aa10.77□□□□□ -0.68
NIN-217ENST00000530997 CENPBP07199 599 aaPredicted RBP10.67□□□□□ -0.7
NIN-217ENST00000530997 ZEB1P37275 1124 aaPredicted RBP10.6□□□□□ -0.71
NIN-217ENST00000530997 CCDC180Q9P1Z9 1646 aa10.55□□□□□ -0.72
NIN-217ENST00000530997 NEFLP07196 543 aa10.49□□□□□ -0.73
NIN-217ENST00000530997 SHROOM4Q9ULL8 1493 aa10.48□□□□□ -0.73
NIN-217ENST00000530997 EHMT2Q96KQ7 1210 aa10.45□□□□□ -0.74
NIN-217ENST00000530997 YTHDC1Q96MU7 727 aaKnown RBP10.42□□□□□ -0.74
NIN-217ENST00000530997 PCGF6Q9BYE7 350 aa10.31□□□□□ -0.76
NIN-217ENST00000530997 DAXXQ9UER7 740 aaPredicted RBP10.31□□□□□ -0.76
NIN-217ENST00000530997 TTBK1Q5TCY1 1321 aaPredicted RBP10.19□□□□□ -0.78
NIN-217ENST00000530997 TRIM41Q8WV44 630 aa10.17□□□□□ -0.78
NIN-217ENST00000530997 ATP1B4Q9UN42 357 aaPredicted RBP10.15□□□□□ -0.78
NIN-217ENST00000530997 UBTFP17480 764 aaKnown RBP10.11□□□□□ -0.79
NIN-217ENST00000530997 RANGAP1P46060 587 aaPredicted RBP10.07□□□□□ -0.8
NIN-217ENST00000530997 RTL5Q5HYW3 569 aaPredicted RBP10.05□□□□□ -0.8
NIN-217ENST00000530997 ZNF316A6NFI3 1004 aaPredicted RBP10.03□□□□□ -0.8
NIN-217ENST00000530997 TRIM26Q12899 539 aaPredicted RBP9.97□□□□□ -0.81
NIN-217ENST00000530997 CLSPNQ9HAW4 1339 aa9.9□□□□□ -0.83
NIN-217ENST00000530997 MYT1LQ9UL68 1186 aa9.89□□□□□ -0.83
NIN-217ENST00000530997 DCAF1Q9Y4B6 1507 aa9.86□□□□□ -0.83
NIN-217ENST00000530997 POLR3GLQ9BT43 218 aa9.85□□□□□ -0.83
NIN-217ENST00000530997 HRCP23327 699 aa9.83□□□□□ -0.84
NIN-217ENST00000530997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.81□□□□□ -0.84
NIN-217ENST00000530997 HNRNPUL2Q1KMD3 747 aaKnown RBP9.81□□□□□ -0.84
NIN-217ENST00000530997 ZBTB47Q9UFB7 747 aaPredicted RBP9.8□□□□□ -0.84
NIN-217ENST00000530997 ZCCHC6Q5VYS8 1495 aaKnown RBP9.77□□□□□ -0.85
NIN-217ENST00000530997 SLC4A1APQ9BWU0 796 aaKnown RBP9.76□□□□□ -0.85
NIN-217ENST00000530997 MYO15BQ96JP2 1530 aa9.75□□□□□ -0.85
NIN-217ENST00000530997 ITGAEP38570 1179 aa9.73□□□□□ -0.85
NIN-217ENST00000530997 CDK11AQ9UQ88 783 aaPredicted RBP9.71□□□□□ -0.85
NIN-217ENST00000530997 DIEXFQ68CQ4 756 aaKnown RBP9.68□□□□□ -0.86
NIN-217ENST00000530997 NEFMP07197 916 aa9.66□□□□□ -0.86
NIN-217ENST00000530997 ANP32BQ92688 251 aaKnown RBP9.66□□□□□ -0.86
NIN-217ENST00000530997 PPARGC1BQ86YN6 1023 aaKnown RBP9.65□□□□□ -0.86
NIN-217ENST00000530997 ANP32CO43423 234 aa9.64□□□□□ -0.87
NIN-217ENST00000530997 GLIPR1L2Q4G1C9 344 aa9.64□□□□□ -0.87
NIN-217ENST00000530997 CANXP27824 592 aaKnown RBP9.62□□□□□ -0.87
NIN-217ENST00000530997 ANP32AP39687 249 aaKnown RBP9.62□□□□□ -0.87
NIN-217ENST00000530997 CNGB1Q14028 1251 aaPredicted RBP9.59□□□□□ -0.87
NIN-217ENST00000530997 NACADO15069 1562 aa9.58□□□□□ -0.88
NIN-217ENST00000530997 CHIC1Q5VXU3 224 aa9.57□□□□□ -0.88
NIN-217ENST00000530997 TRIM52Q96A61 297 aa9.57□□□□□ -0.88
NIN-217ENST00000530997 FAM50AQ14320 339 aaKnown RBP9.56□□□□□ -0.88
NIN-217ENST00000530997 UPF2Q9HAU5 1272 aaKnown RBP9.51□□□□□ -0.89
NIN-217ENST00000530997 HSP90AA1P07900 732 aaKnown RBP9.47□□□□□ -0.89
NIN-217ENST00000530997 GTF3C3Q9Y5Q9 886 aa9.47□□□□□ -0.89
NIN-217ENST00000530997 NEUROD1Q13562 356 aa9.46□□□□□ -0.9
NIN-217ENST00000530997 BCANQ96GW7 911 aa9.46□□□□□ -0.9
NIN-217ENST00000530997 SLC24A1O60721 1099 aa9.45□□□□□ -0.9
NIN-217ENST00000530997 ZNF326Q5BKZ1 582 aaKnown RBP9.43□□□□□ -0.9
NIN-217ENST00000530997 LOC105371045A0A1W2PR82 267 aa9.41□□□□□ -0.9
NIN-217ENST00000530997 RB1CC1Q8TDY2 1594 aa9.4□□□□□ -0.9
NIN-217ENST00000530997 UNC13AQ9UPW8 1703 aa9.4□□□□□ -0.9
NIN-217ENST00000530997 CDK11BP21127 795 aaKnown RBP9.4□□□□□ -0.9
NIN-217ENST00000530997 EIF5BO60841 1220 aaKnown RBP9.4□□□□□ -0.91
NIN-217ENST00000530997 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.37□□□□□ -0.91
NIN-217ENST00000530997 ANP32EQ9BTT0 268 aa9.36□□□□□ -0.91
NIN-217ENST00000530997 ACIN1Q9UKV3 1341 aaKnown RBP9.35□□□□□ -0.91
NIN-217ENST00000530997 NPM2Q86SE8 214 aaKnown RBP9.35□□□□□ -0.91
NIN-217ENST00000530997 ABCC9O60706 1549 aa9.34□□□□□ -0.91
NIN-217ENST00000530997 BCL11AQ9H165 835 aa9.32□□□□□ -0.92
NIN-217ENST00000530997 TNNT2P45379 298 aaPredicted RBP9.3□□□□□ -0.92
NIN-217ENST00000530997 ESF1Q9H501 851 aaKnown RBP9.3□□□□□ -0.92
NIN-217ENST00000530997 MYH16Q9H6N6 1097 aa9.29□□□□□ -0.92
NIN-217ENST00000530997 TONSLQ96HA7 1378 aa9.28□□□□□ -0.92
NIN-217ENST00000530997 DDRGK1Q96HY6 314 aa9.27□□□□□ -0.92
NIN-217ENST00000530997 NCLP19338 710 aaKnown RBP9.27□□□□□ -0.93
NIN-217ENST00000530997 BECN1Q14457 450 aa9.26□□□□□ -0.93
NIN-217ENST00000530997 GOLGA6L22H0YM25 854 aa9.25□□□□□ -0.93
NIN-217ENST00000530997 FKBP8Q14318 412 aa9.23□□□□□ -0.93
NIN-217ENST00000530997 TRIM44Q96DX7 344 aaPredicted RBP9.23□□□□□ -0.93
NIN-217ENST00000530997 CCDC136Q96JN2 1154 aa9.23□□□□□ -0.93
NIN-217ENST00000530997 STAG3Q9UJ98 1225 aa9.22□□□□□ -0.93
NIN-217ENST00000530997 WDR43Q15061 677 aaKnown RBP eCLIP9.22□□□□□ -0.93
NIN-217ENST00000530997 PRDM2Q13029 1718 aa9.2□□□□□ -0.94
NIN-217ENST00000530997 HNRNPUQ00839 825 aaKnown RBP eCLIP9.2□□□□□ -0.94
NIN-217ENST00000530997 SCRIBQ14160 1630 aa9.2□□□□□ -0.94
NIN-217ENST00000530997 FBLN2P98095 1184 aa9.2□□□□□ -0.94
NIN-217ENST00000530997 ZRSR1Q15695 479 aaKnown RBP9.19□□□□□ -0.94
NIN-217ENST00000530997 CASC1Q6TDU7 716 aa9.18□□□□□ -0.94
NIN-217ENST00000530997 TMC1Q8TDI8 760 aa9.17□□□□□ -0.94
NIN-217ENST00000530997 GOLGA6L6A8MZA4 724 aa9.17□□□□□ -0.94
NIN-217ENST00000530997 ZNF777Q9ULD5 760 aaPredicted RBP9.16□□□□□ -0.94
NIN-217ENST00000530997 BAZ1AQ9NRL2 1556 aaPredicted RBP9.16□□□□□ -0.94
NIN-217ENST00000530997 NBR1Q14596 966 aa9.13□□□□□ -0.95
NIN-217ENST00000530997 FAM9BQ8IZU0 186 aa9.13□□□□□ -0.95
NIN-217ENST00000530997 ERICH6BQ5W0A0 696 aa9.13□□□□□ -0.95
NIN-217ENST00000530997 CSRNP3Q8WYN3 585 aa9.12□□□□□ -0.95
NIN-217ENST00000530997 PTMAP06454 111 aaKnown RBP9.12□□□□□ -0.95
NIN-217ENST00000530997 NRDCO43847 1150 aa9.11□□□□□ -0.95
NIN-217ENST00000530997 NPM1P06748 294 aaKnown RBP eCLIP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms