Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC5.95□□□□□ -1.463e-6■□□□□ 11.3
PRPF8Q6P2Q9 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.573e-6■□□□□ 11.3
PRPF8Q6P2Q9 NR5A1-201ENST00000373587 768 ntTSL 315.3■□□□□ 0.042e-7■□□□□ 11.3
PRPF8Q6P2Q9 ACSF2-223ENST00000513101 564 ntTSL 47.25□□□□□ -1.253e-7■□□□□ 11.3
PRPF8Q6P2Q9 DEAF1-212ENST00000530813 668 ntTSL 510.86□□□□□ -0.672e-6■□□□□ 11.3
PRPF8Q6P2Q9 SFSWAP-202ENST00000535202 567 ntTSL 27.29□□□□□ -1.242e-20■□□□□ 11.3
PRPF8Q6P2Q9 CTIF-204ENST00000587769 547 ntTSL 49.1□□□□□ -0.952e-6■□□□□ 11.3
PRPF8Q6P2Q9 TUBGCP6-206ENST00000489511 612 ntTSL 1 (best)9.65□□□□□ -0.862e-6■□□□□ 11.3
PRPF8Q6P2Q9 ASGR1-203ENST00000570576 627 ntTSL 510.37□□□□□ -0.752e-35■□□□□ 11.3
PRPF8Q6P2Q9 BRWD1-214ENST00000484090 429 ntTSL 219.4■□□□□ 0.72e-21■□□□□ 11.3
PRPF8Q6P2Q9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.76■□□□□ 0.272e-21■□□□□ 11.3
PRPF8Q6P2Q9 BRWD1-212ENST00000470108 1176 ntTSL 35.74□□□□□ -1.492e-21■□□□□ 11.3
PRPF8Q6P2Q9 HDAC10-209ENST00000471375 928 ntTSL 516.48■□□□□ 0.231e-8■□□□□ 11.3
PRPF8Q6P2Q9 NFKB1-210ENST00000511926 609 ntTSL 513.82□□□□□ -0.23e-7■□□□□ 11.3
PRPF8Q6P2Q9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.212e-8■□□□□ 11.3
PRPF8Q6P2Q9 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.282e-8■□□□□ 11.3
PRPF8Q6P2Q9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.432e-8■□□□□ 11.3
PRPF8Q6P2Q9 WDR45B-208ENST00000574828 765 ntTSL 313.57□□□□□ -0.243e-9■□□□□ 11.3
PRPF8Q6P2Q9 RFNG-209ENST00000583784 2886 nt11.23□□□□□ -0.615e-10■□□□□ 11.3
PRPF8Q6P2Q9 ANKRD13D-204ENST00000504236 580 ntTSL 314.5□□□□□ -0.094e-7■□□□□ 11.3
PRPF8Q6P2Q9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.5□□□□□ -0.094e-7■□□□□ 11.3
PRPF8Q6P2Q9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.54■□□□□ 0.564e-7■□□□□ 11.3
PRPF8Q6P2Q9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.85■□□□□ 0.454e-7■□□□□ 11.3
PRPF8Q6P2Q9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.83■□□□□ 0.284e-7■□□□□ 11.3
PRPF8Q6P2Q9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.214e-7■□□□□ 11.3
PRPF8Q6P2Q9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.31■□□□□ 0.24e-7■□□□□ 11.3
PRPF8Q6P2Q9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.31■□□□□ 0.24e-7■□□□□ 11.3
PRPF8Q6P2Q9 DPF2-208ENST00000531989 1573 ntTSL 313.89□□□□□ -0.192e-6■□□□□ 11.3
PRPF8Q6P2Q9 PPP1R16A-204ENST00000526564 675 ntTSL 520.65■□□□□ 0.92e-9■□□□□ 11.3
PRPF8Q6P2Q9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.282e-9■□□□□ 11.3
PRPF8Q6P2Q9 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.62e-9■□□□□ 11.3
PRPF8Q6P2Q9 PRKCB-205ENST00000472066 556 ntTSL 310.07□□□□□ -0.82e-9■□□□□ 11.3
PRPF8Q6P2Q9 PRKCB-208ENST00000487674 693 ntTSL 27.46□□□□□ -1.222e-9■□□□□ 11.3
PRPF8Q6P2Q9 PRKCB-203ENST00000463752 599 ntTSL 55.03□□□□□ -1.62e-9■□□□□ 11.3
PRPF8Q6P2Q9 AGAP1-203ENST00000402604 563 ntTSL 411.08□□□□□ -0.648e-7■□□□□ 11.3
PRPF8Q6P2Q9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.67■■□□□ 1.382e-6■□□□□ 11.3
PRPF8Q6P2Q9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.272e-6■□□□□ 11.3
PRPF8Q6P2Q9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.99■■□□□ 1.272e-6■□□□□ 11.3
PRPF8Q6P2Q9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.882e-6■□□□□ 11.3
PRPF8Q6P2Q9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.49■□□□□ 0.872e-6■□□□□ 11.3
PRPF8Q6P2Q9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.37■□□□□ 0.532e-6■□□□□ 11.3
PRPF8Q6P2Q9 ZFAND2B-219ENST00000486734 889 ntTSL 315.31■□□□□ 0.042e-6■□□□□ 11.3
PRPF8Q6P2Q9 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.29□□□□□ -0.282e-6■□□□□ 11.3
PRPF8Q6P2Q9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.282e-6■□□□□ 11.3
PRPF8Q6P2Q9 ZFAND2B-213ENST00000448496 1064 ntTSL 311.92□□□□□ -0.52e-6■□□□□ 11.3
PRPF8Q6P2Q9 FAM46A-204ENST00000412306 546 ntTSL 38.85□□□□□ -0.991e-19■□□□□ 11.3
PRPF8Q6P2Q9 FAM46A-205ENST00000423467 356 ntTSL 58.63□□□□□ -1.031e-19■□□□□ 11.3
PRPF8Q6P2Q9 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC5.79□□□□□ -1.482e-6■□□□□ 11.3
PRPF8Q6P2Q9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.043e-9■□□□□ 11.3
PRPF8Q6P2Q9 CARMIL2-206ENST00000602562 893 ntTSL 513.66□□□□□ -0.223e-9■□□□□ 11.3
PRPF8Q6P2Q9 CARMIL2-203ENST00000602321 4494 ntTSL 213.31□□□□□ -0.283e-9■□□□□ 11.3
PRPF8Q6P2Q9 SLC5A9-205ENST00000471020 1989 ntTSL 1 (best)12.26□□□□□ -0.457e-16■□□□□ 11.3
PRPF8Q6P2Q9 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.493e-9■□□□□ 11.3
PRPF8Q6P2Q9 RN7SL657P-201ENST00000582431 293 ntBASIC7□□□□□ -1.293e-9■□□□□ 11.3
PRPF8Q6P2Q9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -04e-10■□□□□ 11.3
PRPF8Q6P2Q9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.084e-10■□□□□ 11.3
PRPF8Q6P2Q9 SLC22A23-209ENST00000485307 1574 ntTSL 1 (best)10.65□□□□□ -0.74e-10■□□□□ 11.3
PRPF8Q6P2Q9 NFKBIZ-206ENST00000477601 548 ntTSL 36.22□□□□□ -1.412e-6■□□□□ 11.3
PRPF8Q6P2Q9 CNOT3-209ENST00000617930 2047 ntTSL 213.76□□□□□ -0.214e-7■□□□□ 11.3
PRPF8Q6P2Q9 IL17RC-216ENST00000461995 862 ntTSL 316.23■□□□□ 0.192e-6■□□□□ 11.3
PRPF8Q6P2Q9 ERCC1-211ENST00000590701 345 ntTSL 313.12□□□□□ -0.312e-6■□□□□ 11.3
PRPF8Q6P2Q9 COA4-202ENST00000537289 582 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.972e-6■□□□□ 11.3
PRPF8Q6P2Q9 COA4-201ENST00000355693 960 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.062e-6■□□□□ 11.3
PRPF8Q6P2Q9 COA4-203ENST00000537581 566 ntTSL 46.61□□□□□ -1.352e-6■□□□□ 11.3
PRPF8Q6P2Q9 KIAA1468-204ENST00000587198 583 ntTSL 55.38□□□□□ -1.552e-6■□□□□ 11.3
PRPF8Q6P2Q9 ERCC1-216ENST00000592444 449 ntTSL 25.15□□□□□ -1.582e-6■□□□□ 11.3
PRPF8Q6P2Q9 KIAA1468-205ENST00000587714 352 ntTSL 34.16□□□□□ -1.742e-6■□□□□ 11.3
PRPF8Q6P2Q9 KIAA1468-212ENST00000593217 650 ntTSL 33.64□□□□□ -1.832e-6■□□□□ 11.3
PRPF8Q6P2Q9 ARHGAP27-213ENST00000532667 528 ntTSL 58.29□□□□□ -1.082e-6■□□□□ 11.3
PRPF8Q6P2Q9 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.582e-6■□□□□ 11.2
PRPF8Q6P2Q9 NCOA2-202ENST00000518287 6087 ntTSL 55.18□□□□□ -1.582e-6■□□□□ 11.2
PRPF8Q6P2Q9 RHOT2-223ENST00000569706 588 ntTSL 320.67■□□□□ 0.96e-8■□□□□ 11.2
PRPF8Q6P2Q9 APOA2-209ENST00000481511 655 ntTSL 510.87□□□□□ -0.673e-16■□□□□ 11.2
PRPF8Q6P2Q9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.54□□□□□ -2.163e-16■□□□□ 11.2
PRPF8Q6P2Q9 TMEM39B-204ENST00000466321 770 ntTSL 515.72■□□□□ 0.114e-9■□□□□ 11.2
PRPF8Q6P2Q9 TMEM39B-202ENST00000438825 690 ntTSL 513.73□□□□□ -0.214e-9■□□□□ 11.2
PRPF8Q6P2Q9 GSDMD-213ENST00000533348 724 ntTSL 513.14□□□□□ -0.311e-7■□□□□ 11.2
PRPF8Q6P2Q9 SELENOP-211ENST00000513303 714 ntTSL 210.91□□□□□ -0.664e-9■□□□□ 11.2
PRPF8Q6P2Q9 SELENOP-208ENST00000510965 787 ntTSL 59.73□□□□□ -0.854e-9■□□□□ 11.2
PRPF8Q6P2Q9 SELENOP-214ENST00000514985 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.084e-9■□□□□ 11.2
PRPF8Q6P2Q9 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC7.33□□□□□ -1.244e-9■□□□□ 11.2
PRPF8Q6P2Q9 SELENOP-212ENST00000514218 1047 ntTSL 56.52□□□□□ -1.374e-9■□□□□ 11.2
PRPF8Q6P2Q9 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.44e-9■□□□□ 11.2
PRPF8Q6P2Q9 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.544e-9■□□□□ 11.2
PRPF8Q6P2Q9 SELENOP-210ENST00000512980 4175 ntTSL 25.14□□□□□ -1.594e-9■□□□□ 11.2
PRPF8Q6P2Q9 MRE11-210ENST00000541157 594 ntTSL 48□□□□□ -1.131e-6■□□□□ 11.2
PRPF8Q6P2Q9 RGS14-205ENST00000503110 587 ntTSL 516.69■□□□□ 0.264e-7■□□□□ 11.2
PRPF8Q6P2Q9 RGS14-211ENST00000512490 565 ntTSL 215.52■□□□□ 0.084e-7■□□□□ 11.2
PRPF8Q6P2Q9 RGS14-213ENST00000514713 817 ntTSL 1 (best)13.73□□□□□ -0.214e-7■□□□□ 11.2
PRPF8Q6P2Q9 SLC38A3-202ENST00000417851 438 ntTSL 311.81□□□□□ -0.523e-8■□□□□ 11.2
PRPF8Q6P2Q9 MROH1-210ENST00000534508 1611 ntTSL 512.25□□□□□ -0.454e-7■□□□□ 11.2
PRPF8Q6P2Q9 ENO1-205ENST00000492343 826 ntTSL 1 (best)6.85□□□□□ -1.312e-16■□□□□ 11.2
PRPF8Q6P2Q9 RNF10-214ENST00000540046 635 ntTSL 310.65□□□□□ -0.71e-6■□□□□ 11.2
PRPF8Q6P2Q9 DCAF11-221ENST00000559382 549 ntTSL 514.16□□□□□ -0.143e-9■□□□□ 11.2
PRPF8Q6P2Q9 IL4R-206ENST00000562142 518 ntTSL 320.88■□□□□ 0.934e-6■□□□□ 11.2
PRPF8Q6P2Q9 FAM192A-217ENST00000567044 893 ntTSL 518.79■□□□□ 0.62e-6■□□□□ 11.2
PRPF8Q6P2Q9 FAM192A-209ENST00000565458 1029 ntTSL 518.26■□□□□ 0.512e-6■□□□□ 11.2
PRPF8Q6P2Q9 IL4R-211ENST00000563926 594 ntTSL 413.75□□□□□ -0.214e-6■□□□□ 11.2
PRPF8Q6P2Q9 IL4R-209ENST00000563787 701 ntTSL 311.12□□□□□ -0.635e-8■□□□□ 11.2
PRPF8Q6P2Q9 FAM192A-205ENST00000562406 519 ntTSL 39.9□□□□□ -0.822e-6■□□□□ 11.2
Retrieved 100 of 73,762 protein–RNA pairs in 866.3 ms