RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 AEBP2Q6ZN18 517 aaPredicted RBP18.09■□□□□ 0.49
ERCC1-216ENST00000592444 CHIC1Q5VXU3 224 aa17.05■□□□□ 0.32
ERCC1-216ENST00000592444 SENP3Q9H4L4 574 aaPredicted RBP15.6■□□□□ 0.09
ERCC1-216ENST00000592444 PHF23Q9BUL5 403 aaPredicted RBP15.31■□□□□ 0.04
ERCC1-216ENST00000592444 FOXD1Q16676 465 aa14.5□□□□□ -0.09
ERCC1-216ENST00000592444 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
ERCC1-216ENST00000592444 MSH5O43196 834 aa13.77□□□□□ -0.21
ERCC1-216ENST00000592444 DNAJC5BQ9UF47 199 aa13.63□□□□□ -0.23
ERCC1-216ENST00000592444 PIAS4Q8N2W9 510 aaPredicted RBP13.54□□□□□ -0.24
ERCC1-216ENST00000592444 PLPPR3Q6T4P5 718 aa13.5□□□□□ -0.25
ERCC1-216ENST00000592444 ABCC9O60706 1549 aa13.49□□□□□ -0.25
ERCC1-216ENST00000592444 NISCHQ9Y2I1 1504 aa13.36□□□□□ -0.27
ERCC1-216ENST00000592444 PPP6R1Q9UPN7 881 aa13.29□□□□□ -0.28
ERCC1-216ENST00000592444 ADRA2BP18089 450 aa13.28□□□□□ -0.28
ERCC1-216ENST00000592444 DNAJC5Q9H3Z4 198 aa13.23□□□□□ -0.29
ERCC1-216ENST00000592444 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
ERCC1-216ENST00000592444 CCDC180Q9P1Z9 1646 aa12.38□□□□□ -0.43
ERCC1-216ENST00000592444 RB1CC1Q8TDY2 1594 aa12.32□□□□□ -0.44
ERCC1-216ENST00000592444 SCAF1Q9H7N4 1312 aaKnown RBP12.3□□□□□ -0.44
ERCC1-216ENST00000592444 DMRT2Q9Y5R5 561 aa12.28□□□□□ -0.44
ERCC1-216ENST00000592444 TRIM41Q8WV44 630 aa12.27□□□□□ -0.45
ERCC1-216ENST00000592444 MAPK8IP2Q13387 824 aaPredicted RBP12.26□□□□□ -0.45
ERCC1-216ENST00000592444 CECR2Q9BXF3 1484 aa12.24□□□□□ -0.45
ERCC1-216ENST00000592444 CC2D2AQ9P2K1 1620 aa12.1□□□□□ -0.47
ERCC1-216ENST00000592444 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
ERCC1-216ENST00000592444 BICRAQ9NZM4 1560 aa12.03□□□□□ -0.48
ERCC1-216ENST00000592444 CUX2O14529 1486 aa12□□□□□ -0.49
ERCC1-216ENST00000592444 CACNB1Q02641 598 aaPredicted RBP11.99□□□□□ -0.49
ERCC1-216ENST00000592444 NACADO15069 1562 aa11.97□□□□□ -0.49
ERCC1-216ENST00000592444 DCAF8L1A6NGE4 600 aa11.89□□□□□ -0.51
ERCC1-216ENST00000592444 DCAF8L2P0C7V8 631 aa11.85□□□□□ -0.51
ERCC1-216ENST00000592444 EIF4G1Q04637 1599 aaKnown RBP11.81□□□□□ -0.52
ERCC1-216ENST00000592444 PPP4R3CPQ6ZMV5 832 aa11.77□□□□□ -0.53
ERCC1-216ENST00000592444 HOXD11P31277 338 aaPredicted RBP11.71□□□□□ -0.53
ERCC1-216ENST00000592444 ERCC6Q03468 1493 aa11.7□□□□□ -0.54
ERCC1-216ENST00000592444 SHROOM4Q9ULL8 1493 aa11.68□□□□□ -0.54
ERCC1-216ENST00000592444 RNF39Q9H2S5 420 aa11.65□□□□□ -0.54
ERCC1-216ENST00000592444 CNKSR2Q8WXI2 1034 aa11.63□□□□□ -0.55
ERCC1-216ENST00000592444 RNF216Q9NWF9 866 aaPredicted RBP11.59□□□□□ -0.55
ERCC1-216ENST00000592444 ILDR1Q86SU0 546 aaPredicted RBP11.54□□□□□ -0.56
ERCC1-216ENST00000592444 C1QBPQ07021 282 aaKnown RBP11.53□□□□□ -0.56
ERCC1-216ENST00000592444 MYO15BQ96JP2 1530 aa11.44□□□□□ -0.58
ERCC1-216ENST00000592444 TRHP20396 242 aaPredicted RBP11.4□□□□□ -0.58
ERCC1-216ENST00000592444 SCRIBQ14160 1630 aa11.35□□□□□ -0.59
ERCC1-216ENST00000592444 OSCARQ8IYS5 282 aa11.34□□□□□ -0.59
ERCC1-216ENST00000592444 THOC2Q8NI27 1593 aaKnown RBP11.33□□□□□ -0.6
ERCC1-216ENST00000592444 NCBP3Q53F19 620 aaKnown RBP11.32□□□□□ -0.6
ERCC1-216ENST00000592444 NESP48681 1621 aa11.31□□□□□ -0.6
ERCC1-216ENST00000592444 RIMBP3CA6NJZ7 1639 aa11.27□□□□□ -0.61
ERCC1-216ENST00000592444 RIMBP3BA6NNM3 1639 aa11.27□□□□□ -0.61
ERCC1-216ENST00000592444 RIMBP3Q9UFD9 1639 aa11.27□□□□□ -0.61
ERCC1-216ENST00000592444 BAZ1AQ9NRL2 1556 aaPredicted RBP11.25□□□□□ -0.61
ERCC1-216ENST00000592444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.25□□□□□ -0.615e-7■■□□□ 12.5
ERCC1-216ENST00000592444 SMARCA2P51531 1590 aa11.2□□□□□ -0.62
ERCC1-216ENST00000592444 CYB5RLQ6IPT4 315 aa11.17□□□□□ -0.62
ERCC1-216ENST00000592444 NPM3O75607 178 aaKnown RBP11.14□□□□□ -0.63
ERCC1-216ENST00000592444 ARHGEF11O15085 1522 aa11.13□□□□□ -0.63
ERCC1-216ENST00000592444 NCAPD3P42695 1498 aa11.1□□□□□ -0.63
ERCC1-216ENST00000592444 KIF21AQ7Z4S6 1674 aa11.08□□□□□ -0.64
ERCC1-216ENST00000592444 PDS5BQ9NTI5 1447 aa10.99□□□□□ -0.65
ERCC1-216ENST00000592444 LAMC3Q9Y6N6 1575 aa10.99□□□□□ -0.65
ERCC1-216ENST00000592444 ARAP1Q96P48 1450 aa10.95□□□□□ -0.66
ERCC1-216ENST00000592444 MRC2Q9UBG0 1479 aa10.95□□□□□ -0.66
ERCC1-216ENST00000592444 WDR62O43379 1518 aa10.94□□□□□ -0.66
ERCC1-216ENST00000592444 DCAF1Q9Y4B6 1507 aa10.93□□□□□ -0.66
ERCC1-216ENST00000592444 ATAD2BQ9ULI0 1458 aa10.93□□□□□ -0.66
ERCC1-216ENST00000592444 KCNA4P22459 653 aa10.91□□□□□ -0.66
ERCC1-216ENST00000592444 CAPN15O75808 1086 aa10.9□□□□□ -0.66
ERCC1-216ENST00000592444 U3KPZ7 1027 aaPredicted RBP10.89□□□□□ -0.67
ERCC1-216ENST00000592444 HMGXB3Q12766 1538 aa10.89□□□□□ -0.67
ERCC1-216ENST00000592444 LMTK3Q96Q04 1460 aa10.85□□□□□ -0.67
ERCC1-216ENST00000592444 ZCCHC6Q5VYS8 1495 aaKnown RBP10.83□□□□□ -0.68
ERCC1-216ENST00000592444 SOCS7O14512 581 aa10.83□□□□□ -0.68
ERCC1-216ENST00000592444 KDM4FA0A1W2PPD8 638 aa10.82□□□□□ -0.68
ERCC1-216ENST00000592444 DSG3P32926 999 aa10.82□□□□□ -0.68
ERCC1-216ENST00000592444 POTEHQ6S545 545 aa10.81□□□□□ -0.68
ERCC1-216ENST00000592444 FBXO41Q8TF61 875 aa10.81□□□□□ -0.68
ERCC1-216ENST00000592444 SPINK5Q9NQ38 1064 aaPredicted RBP10.81□□□□□ -0.68
ERCC1-216ENST00000592444 BAZ1BQ9UIG0 1483 aaKnown RBP10.76□□□□□ -0.69
ERCC1-216ENST00000592444 ILDR2Q71H61 639 aa10.75□□□□□ -0.69
ERCC1-216ENST00000592444 APLP2Q06481 763 aa10.73□□□□□ -0.69
ERCC1-216ENST00000592444 CADPSQ9ULU8 1353 aa10.73□□□□□ -0.69
ERCC1-216ENST00000592444 RSF1Q96T23 1441 aaPredicted RBP10.71□□□□□ -0.69
ERCC1-216ENST00000592444 CEP164Q9UPV0 1460 aa10.7□□□□□ -0.7
ERCC1-216ENST00000592444 ERCC6L2Q5T890 1561 aa10.69□□□□□ -0.7
ERCC1-216ENST00000592444 SMARCA4P51532 1647 aa10.66□□□□□ -0.7
ERCC1-216ENST00000592444 ZNF608Q9ULD9 1512 aaPredicted RBP10.65□□□□□ -0.7
ERCC1-216ENST00000592444 SLC4A2P04920 1241 aa10.65□□□□□ -0.7
ERCC1-216ENST00000592444 ZNF219Q9P2Y4 722 aaPredicted RBP10.63□□□□□ -0.71
ERCC1-216ENST00000592444 HECW2Q9P2P5 1572 aa10.62□□□□□ -0.71
ERCC1-216ENST00000592444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.61□□□□□ -0.71
ERCC1-216ENST00000592444 FBLN2P98095 1184 aa10.61□□□□□ -0.71
ERCC1-216ENST00000592444 HNRNPUL2Q1KMD3 747 aaKnown RBP10.61□□□□□ -0.71
ERCC1-216ENST00000592444 CHD1O14646 1710 aa10.61□□□□□ -0.71
ERCC1-216ENST00000592444 FANCD2Q9BXW9 1451 aa10.61□□□□□ -0.71
ERCC1-216ENST00000592444 URB2Q14146 1524 aaKnown RBP10.59□□□□□ -0.71
ERCC1-216ENST00000592444 DISP3Q9P2K9 1392 aa10.59□□□□□ -0.71
ERCC1-216ENST00000592444 ABCB7O75027 752 aa10.57□□□□□ -0.72
ERCC1-216ENST00000592444 SYNJ2O15056 1496 aa10.52□□□□□ -0.73
ERCC1-216ENST00000592444 IFT140Q96RY7 1462 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms