Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSM5Q9Y4Y9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 KRT16P3-201ENST00000439127 1283 ntBASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LSM5Q9Y4Y9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 SERBP1P1-201ENST00000396021 1160 ntBASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM5Q9Y4Y9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 AL691432.2-201ENST00000607222 2038 ntBASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSM5Q9Y4Y9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 AL138724.1-201ENST00000606771 1088 ntBASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 AC136469.2-201ENST00000623944 1028 ntBASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 PKD1P1-201ENST00000458669 6805 ntBASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LSM5Q9Y4Y9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.46■□□□□ 0.23
LSM5Q9Y4Y9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LSM5Q9Y4Y9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LSM5Q9Y4Y9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
LSM5Q9Y4Y9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms