Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 CCDC92B-201ENST00000575506 885 ntBASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 AC243732.1-201ENST00000612648 864 ntBASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 MIR6084-201ENST00000622012 110 ntBASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
UBE2D4Q9Y2X8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 AC105265.2-201ENST00000467189 838 ntBASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 AC131212.1-201ENST00000613771 668 ntBASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 AC008406.3-201ENST00000620001 1374 ntBASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 Z82202.1-201ENST00000623446 1880 ntBASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2D4Q9Y2X8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 KRT18P20-201ENST00000548986 1279 ntBASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 AP001160.3-201ENST00000601484 763 ntBASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 AC104187.1-201ENST00000607510 612 ntBASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 AL031432.3-201ENST00000607698 485 ntBASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2D4Q9Y2X8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
UBE2D4Q9Y2X8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
UBE2D4Q9Y2X8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms