Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ZC3H4Q9UPT8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
ZC3H4Q9UPT8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ZC3H4Q9UPT8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.39■■□□□ 1.5
ZC3H4Q9UPT8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC24.39■■□□□ 1.5
ZC3H4Q9UPT8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
ZC3H4Q9UPT8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.39■■□□□ 1.49
ZC3H4Q9UPT8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ZC3H4Q9UPT8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ZC3H4Q9UPT8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ZC3H4Q9UPT8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ZC3H4Q9UPT8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC24.38■■□□□ 1.49
ZC3H4Q9UPT8 PPP1R14BP5-201ENST00000440334 435 ntBASIC24.38■■□□□ 1.49
ZC3H4Q9UPT8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC24.38■■□□□ 1.49
ZC3H4Q9UPT8 AL691432.3-201ENST00000621860 400 ntBASIC24.38■■□□□ 1.49
ZC3H4Q9UPT8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ZC3H4Q9UPT8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
ZC3H4Q9UPT8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ZC3H4Q9UPT8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
ZC3H4Q9UPT8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ZC3H4Q9UPT8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
ZC3H4Q9UPT8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
ZC3H4Q9UPT8 PCED1CP-201ENST00000419887 785 ntBASIC24.37■■□□□ 1.49
ZC3H4Q9UPT8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC24.37■■□□□ 1.49
ZC3H4Q9UPT8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC24.37■■□□□ 1.49
ZC3H4Q9UPT8 AL445675.2-201ENST00000620291 557 ntBASIC24.37■■□□□ 1.49
ZC3H4Q9UPT8 AL138966.2-201ENST00000621997 464 ntBASIC24.37■■□□□ 1.49
ZC3H4Q9UPT8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ZC3H4Q9UPT8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC24.37■■□□□ 1.49
ZC3H4Q9UPT8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.37■■□□□ 1.49
ZC3H4Q9UPT8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.37■■□□□ 1.49
ZC3H4Q9UPT8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
ZC3H4Q9UPT8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
ZC3H4Q9UPT8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
ZC3H4Q9UPT8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC24.36■■□□□ 1.49
ZC3H4Q9UPT8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC24.36■■□□□ 1.49
ZC3H4Q9UPT8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ZC3H4Q9UPT8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ZC3H4Q9UPT8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ZC3H4Q9UPT8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
ZC3H4Q9UPT8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ZC3H4Q9UPT8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC24.36■■□□□ 1.49
ZC3H4Q9UPT8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
ZC3H4Q9UPT8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 TSPY5P-201ENST00000426936 936 ntBASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 FAM86EP-206ENST00000510506 987 ntBASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 AC092647.4-201ENST00000457211 535 ntBASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 B3GAT3P1-201ENST00000471720 806 ntBASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 YBX1P2-201ENST00000489612 999 ntBASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 AC139887.4-201ENST00000607877 719 ntBASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
ZC3H4Q9UPT8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.34■■□□□ 1.49
ZC3H4Q9UPT8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
ZC3H4Q9UPT8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ZC3H4Q9UPT8 IER3-202ENST00000376377 1350 ntBASIC24.34■■□□□ 1.49
ZC3H4Q9UPT8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
ZC3H4Q9UPT8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ZC3H4Q9UPT8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC24.34■■□□□ 1.49
ZC3H4Q9UPT8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC24.34■■□□□ 1.49
ZC3H4Q9UPT8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC24.34■■□□□ 1.49
ZC3H4Q9UPT8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC24.34■■□□□ 1.49
ZC3H4Q9UPT8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
ZC3H4Q9UPT8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZC3H4Q9UPT8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZC3H4Q9UPT8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZC3H4Q9UPT8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC24.33■■□□□ 1.49
ZC3H4Q9UPT8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.33■■□□□ 1.49
ZC3H4Q9UPT8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZC3H4Q9UPT8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
ZC3H4Q9UPT8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
ZC3H4Q9UPT8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
ZC3H4Q9UPT8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.48
ZC3H4Q9UPT8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC24.33■■□□□ 1.48
ZC3H4Q9UPT8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC24.33■■□□□ 1.48
ZC3H4Q9UPT8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
ZC3H4Q9UPT8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC24.33■■□□□ 1.48
ZC3H4Q9UPT8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC24.33■■□□□ 1.48
ZC3H4Q9UPT8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
ZC3H4Q9UPT8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms